KEGG   Ricinus communis (castor bean): 8288447
Entry
8288447           CDS       T01087                                 
Name
(RefSeq) WD repeat-containing protein 48
  KO
K15361  WD repeat-containing protein 48
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    8288447
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rcu03400]
    8288447
DNA repair and recombination proteins [BR:rcu03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     8288447
SSDB
Motif
Pfam: WD40 WD40_Prp19 DUF3337 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st Beta-prop_TEP1_2nd EIF3I Beta-prop_EML_2 Beta-prop_EML Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_SPT8 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_DCAF4 RAWUL Beta-prop_WDR75_2nd Beta-prop_DCAF12 WD40_MABP1-WDR62_1st WD40_RFWD3 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 8288447
NCBI-ProteinID: XP_002512270
UniProt: B9REV1
LinkDB
Position
10:11449970..11469824
AA seq 764 aa
MHRVGSAGNTSSSVRPRKEKRLTYVLNDADDKKHCSGVNCLAVLKSSVSDGSDYLFTGSR
DGTLKRWALAEDSATCSATFESHVDWVNDAVLVGDSTLISCSSDTTLKTWNCLSDGTCTK
TLRQHSDYVTCLAAAEKNSNIVASGGLGGEVFIWDLEAALAPVSKSNDPMEDDCSNGVNG
SSNSLPMTSLRTISSSNSISMHNSQSHGFVPIAAKGHKESVYALAMNDSGSILVSGGTEK
VVRVWDPRTGSKAMKLRGHTDNIRALLLDSTGRFCLSGSSDSMIRLWDLGQQRCMHSYAV
HTDSVWALASTPAFSHVYSGGRDNSLYLTDLATRESLLLCTKEHPILQLALHDDGIWVAT
TDSSVDRWPAEGHNPQKVFQRGGSFLAGNLSFSRARVSLEGSTPIPVYKEPTLGIPGTPA
IVQHEILNNRRHVLTKDTVGSVKLWEITRGVVVEDYGKVSFEEKKEQLYEMVSIPAWFTV
DTRLGSLSVHLETPQCFHAEMYSADLNIAGKPEDDKVNLARETLKGLLAHWLAKRRQRLG
SQVSANGDVLPGKDITPRSLAHSRVEVDGSTENDSMVYPPFEFSTVSPPSIITEGSQGGP
WRKKVTDLDGTEDEKDFPWWCLDCVLNNRIPQRENSKCSFYLHPCEGSTVQILTQGKLSA
PRILRIHKVVNYVIEKLVLDKPLDGVNPDGTFVPGLGGGQSQHSAVGDGSYRPGLKPWQK
LRPSIEILCNNQVLSPDMSLATVKAYIWKKQEDLVLNYRVVQGR
NT seq 2295 nt   +upstreamnt  +downstreamnt
atgcaccgagtgggtagtgcagggaacacgtcaagttctgttcgcccacgcaaagagaag
aggcttacatatgtgctgaatgatgctgacgataagaagcattgttctggcgtaaattgc
ctggctgtattaaagtcgtctgtttctgatgggtctgattacctattcactgggagtcgt
gatggcacgctgaagagatgggcactggctgaagattctgctacttgctccgcaactttt
gagtcacatgtagattgggtaaatgatgcggttcttgttggtgatagtacacttatttcc
tgctcttcagacaccacccttaagacatggaattgcttgtctgatggaacttgtaccaag
actctccgtcagcactctgactatgttacttgtcttgctgcagcagaaaaaaatagcaat
atcgttgcctctggtggccttggtggggaggtttttatatgggatcttgaagctgcactt
gcaccagtctcaaagtcaaatgatcctatggaagatgattgttcaaatggtgtcaatgga
tctagtaactcgttgcccatgacaagtttacgcaccattagctcaagcaacagcatatct
atgcataattctcagtcccatggatttgtcccaattgctgccaaaggccataaggaatca
gtttatgcactcgcaatgaatgatagtggatctattcttgtgtctggtggaactgagaag
gtcgtgcgggtttgggatccaaggactggttcgaaggcaatgaagctaagggggcacact
gataatatcagagctctgcttctggactccactggcaggttttgcttatcagggtcttct
gactccatgatcagactatgggaccttggtcagcagcgttgcatgcattcatatgctgtg
catacagattctgtttgggcacttgccagcaccccagcatttagtcatgtctatagtggt
gggagggataattctttatacttgacagacctggcaacaagagagagtcttttgctttgt
acgaaggaacatcccattttgcaactagcattgcatgatgatggcatatgggttgcaact
acagattcttcagttgatagatggcccgctgaaggacacaatcctcaaaaggtctttcaa
agaggtggttcatttttagcaggaaacctgtctttttcaagggctagggtctccttagaa
gggtctacccctattcctgtttacaaagaaccaaccttaggcattcctgggactccagcg
atagtgcagcatgaaattctaaacaatagaaggcatgtcttgactaaggatactgttggt
tccgtgaagctatgggagatcacaaggggtgttgtagttgaagactatggaaaggtgtcg
tttgaagagaaaaaggaacaattatatgaaatggtaagtattcctgcatggttcaccgtg
gatacaaggcttggaagcttgtctgttcatttggagacaccacaatgctttcatgctgag
atgtattctgctgaccttaacatagctggaaaacctgaagatgacaaggttaatctagct
cgtgaaacccttaaaggtctgttggctcattggttggctaaaagaaggcaaagacttgga
tcccaggtttcagctaatggggatgtcttacctgggaaggatattactcctagaagtctt
gcacattccagagtagaggtggatggtagtactgaaaatgactccatggtgtatcctcca
tttgaattttcaacagtatcgcctccttcgattattacggaagggtctcaaggaggccca
tggagaaagaaagttactgatttagatggaactgaagatgaaaaggacttcccttggtgg
tgtttagattgcgtgttgaataatcgcatccctcaaagagaaaatagcaagtgcagcttt
tatctacatccatgcgaaggatcaactgttcagatcctcacacaaggcaaactaagtgca
ccccgcatactgagaatacataaagttgtcaattatgtcattgaaaagctggtccttgac
aagccgttggatggcgttaatcctgatgggacatttgttcctggacttggtggagggcag
tcgcagcattcagcagttggagatggatcctatagacctggactgaagccttggcaaaag
cttaggccttccatagagattttgtgcaacaatcaggtgttatccccagacatgagctta
gccacagtcaaagcttacatatggaagaaacaagaggatcttgttctcaactatagagtg
gttcagggaaggtga

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