Ricinus communis (castor bean): 8288722
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Entry
8288722 CDS
T01087
Name
(RefSeq) glycogen synthase isoform X3
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00500
Starch and sucrose metabolism
rcu01100
Metabolic pathways
rcu01110
Biosynthesis of secondary metabolites
Module
rcu_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
8288722
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rcu01003
]
8288722
Enzymes [BR:
rcu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
8288722
Glycosyltransferases [BR:
rcu01003
]
Polysaccharide
Storage polysaccharide
8288722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
Glyco_transf_4
Glycos_transf_1
Glyco_trans_4_4
AHSP
Motif
Other DBs
NCBI-GeneID:
8288722
NCBI-ProteinID:
XP_015580690
LinkDB
All DBs
Position
7:complement(5002988..5019528)
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AA seq
688 aa
AA seq
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MEISLNALILKPVRFHKLNTTNTKRIKSPSFCCLRKNEEAYGLLKSPSSKLERVVESHDN
VKMSQENFLPSSSESEAKHKDIWQLFKEAQQNILYLNKQRLLTVEELNKANQEKELLLDK
IEQLEAEKQAVLEKDKQSMCCKLLLRIDSMVLTGMITTSEASILRKAVMDYKLNVADMLF
DNEKESDAELLAELRHFSYRSKRSSLHIVHICTEMAPVTEVGYLASYVTGLSLALQKKGH
LVEVILPKYASLNLSEIHGLQEIQAESYSYFNGQLHGNKIWTGVVNGIGVTFIQPLYYSS
FFNREKIYGYTDDFERFSYFSRASLDFLTKSGKQPDVLHIHNWETAIVGPLFWDVFAKQG
LEGTRILLTCHSLDSQCLEKPDMLALCGLDPGRLHRPDRLQDNAKTQFVNILKGGIVYSN
KVVIVSSIHSKSRFIQDLSRGLGPTLSIHQDKLLVTPYGFDKSTWDPSKDRFLPENYSKD
DMKGKTVCRVALQQYVGLSNNTSVVLVGCILSELSDFNVDSLKAVVWNATRNNVQFIFMG
SKMLSANRALESLQKELKSENVRFISKYKEVLSHLIFAGSDIILCLSFHDPLLQVPLKAL
KYGAAPVAVTPNENRVRDLVDQDQETNKLSKFIRSTYENMSLSEALDEIKNDPSKWKQRI
ANGMAMDFSWDAECCDIHVSAYTALKEL
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggaaatttcattaaacgccttgattcttaagcctgttcgtttccacaaactcaacaca
actaacacaaaacgcattaaatctccttcattttgctgcttgaggaagaatgaggaagct
tatggtttactgaaatcaccttcttcaaaattagagcgagtggtagaaagtcatgataat
gtgaaaatgtctcaggaaaactttcttccatctagttctgaatcggaagcgaagcataag
gatatatggcagctctttaaagaagctcagcaaaatattctatatttaaacaaacaacgt
cttctgactgttgaggaactgaacaaagcaaaccaagagaaagagttgttgcttgataaa
atagagcaattggaggctgaaaaacaagctgttctggaaaaagataagcaatctatgtgc
tgcaaattgctgcttcgaatagactcaatggttctcaccggaatgattaccacttcggag
gcatctattctgagaaaggcagtcatggattacaaacttaatgtagctgatatgctcttt
gacaatgagaaggaaagtgatgctgagcttctggcagaacttcgtcacttctcatacaga
agcaaaaggagcagtttacacattgtccatatttgtactgagatggcaccagtgacagag
gttggatatttggcatcttatgtgacaggattatcacttgcgctgcaaaagaagggccac
ttggtagaggttattttgccaaagtatgcaagtttgaacctcagtgaaattcacgggctg
caagaaattcaagcagagtcttattcatattttaatggtcaattgcatggaaacaaaatt
tggactggagttgtcaatggtattggagttacttttattcaacctttgtactactcatcc
ttttttaaccgcgagaagatatatggctacacagatgactttgaacgatttagctatttt
tctcgagcttcattggattttttaacaaaatctggaaaacagcctgatgtgttacacata
cataactgggagactgctattgttggaccactcttctgggatgtttttgctaaacagggg
cttgaaggtactagaattttgttgacatgtcacagccttgattcacagtgccttgagaaa
cctgatatgctggcactttgtggacttgatcctggtagacttcatcgtcctgatcgcttg
caagataatgccaagacacaatttgttaatattctaaagggtggaattgtatactctaat
aaagttgtgatagtatcatccatacattcaaaaagcaggtttattcaagatttgagtcgt
ggattgggacctaccttatccattcaccaggacaagttgcttgttactccttatggattt
gacaagtccacctgggatccctcgaaagacagatttcttcctgaaaattatagtaaagat
gacatgaaggggaaaactgtttgcagagttgcattgcagcagtatgtgggattgtcaaac
aacacctctgttgttcttgtagggtgtatcttatcagagttgtcagattttaatgtggat
agcctgaaggcagtggtttggaatgctaccaggaataatgtccagttcatcttcatggga
agtaaaatgctaagtgcaaacagggcactggaatctcttcagaaggagctcaagagtgaa
aatgtgagatttataagcaaatataaagaagttctatcgcatctaatctttgcgggatcg
gacataatattgtgtctatcttttcatgatcctttgcttcaagttccgctcaaagctttg
aaatatggagcagctccggttgcagtaacaccaaatgagaaccgagtcagagatttggtg
gatcaagaccaagaaaccaataaattatcaaagtttattaggtctacctatgaaaatatg
tccctgagcgaggcccttgatgaaattaagaacgacccatcaaaatggaagcaaaggata
gcaaatggtatggcaatggacttctcctgggatgcagagtgctgtgacattcatgtttct
gcatacacagccctaaaagaattgtga
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