KEGG   Ricinus communis (castor bean): 8288978
Entry
8288978           CDS       T01087                                 
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
  KO
K04354  serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03015  mRNA surveillance pathway
rcu04382  Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    8288978
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    8288978
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rcu01009]
    8288978
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rcu03019]
    8288978
   03036 Chromosome and associated proteins [BR:rcu03036]
    8288978
Protein phosphatases and associated proteins [BR:rcu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     8288978
Messenger RNA biogenesis [BR:rcu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     8288978
Chromosome and associated proteins [BR:rcu03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     8288978
SSDB
Motif
Pfam: WD40 WD40_Prp19 WDR55 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_Vps41
Other DBs
NCBI-GeneID: 8288978
NCBI-ProteinID: XP_002511371
UniProt: B9RAZ6
LinkDB
Position
4:26848616..26854373
AA seq 506 aa
MTSSSGKFPSLPPLEWKFSQVFGERIPGEDVQDADVVSAIEFDKSGDYLAVGDRGGRVVI
FERKDRKDTPNQYNSRNELETLDFTFTGHPIYQYKTEFQSHEPEFDYLKSLEIEEKINRI
KWCATPNGSLFILSTNDKTIKLWKVKECKAKKVKEIDPTSIVCSESALLAERSFIREQGK
PSNGYHLGWTENNSSPFQEGHTKFACAEDTTRASCRKVYAHAHDFNINSISNNSDGETFI
SADDLRINLWNLEISDQCFNIIDMKPSNMEDLTEVITSAEFHPLYCNMLAYSSSRGFIHL
VDMRQSALCDQSARILQDAECRGSKSFFTEIIASISDVKFTNDGHHILSRDYMNLKLWDI
RMDPLPISIFKIHEHLRPKLSDLYNNDSIFDKFECCISGDGLHFATGSYSNLLRIFSYGV
GSENGITVEASKNPNRKSLPRSTSRARRSSLSNLTRGFYWHGNENSSSGGNEFSCDLTSK
LLHLAWHPTTNMIACSSGNSLYMYYA
NT seq 1521 nt   +upstreamnt  +downstreamnt
atgacttcgagctcaggaaagtttccttctcttcctcctcttgagtggaagttctctcaa
gtctttggtgaaagaattcctggtgaagatgttcaagatgctgatgttgtatctgcaatt
gaattcgacaaaagtggggattaccttgcagttggagatagaggcggccgtgttgtgatt
tttgaaagaaaagacaggaaagatactccaaaccaatacaattctcgaaatgagttggag
acattggatttcaccttcacaggacatcccatatatcaatacaagaccgaatttcagtct
catgaacccgagtttgattatttgaagagtttagagattgaggagaagattaatagaata
aaatggtgtgcaactcccaacggatcattatttatcctttcaacaaatgataagacaatt
aagttgtggaaggttaaggaatgtaaggctaagaaagtaaaagaaatagaccccacttca
atagtgtgttcagaaagtgcccttttggctgaaagaagtttcataagagagcaaggcaaa
ccatctaatggctatcatctgggatggacagagaataacagctcgccattccaagaaggg
cacaccaagtttgcttgtgctgaagacacaactcgtgctagttgtcgaaaggtgtatgct
catgctcatgattttaacatcaactcaatctctaacaatagtgatggtgagacatttatt
tctgcagacgacctccgcattaacttatggaaccttgagatcagtgatcagtgtttcaat
atcattgacatgaaaccatcaaacatggaggatcttactgaggtcataacatcagctgaa
ttccatccactctactgtaatatgcttgcatacagcagctccagaggttttattcatcta
gttgacatgcggcagtcagcattatgcgatcagagtgcaagaattttacaagatgcagaa
tgccgcgggtcaaaatcattctttacagagatcattgcatctatctctgatgtaaagttc
acaaatgatggacaccacattctaagtcgagattatatgaatttaaagttgtgggatata
cgtatggatcctttgcctatttccatattcaagattcatgagcacctaaggcctaagtta
tctgatttgtataataatgactccatatttgataaatttgagtgctgcatcagtggagat
ggacttcattttgctacaggatcttacagcaatcttttacgaatattctcctatggggtc
ggaagcgaaaacggcattacagtggaagctagtaagaatccaaacaggaagtcacttccc
cgttccacttcaagggctaggagatcatccttgagcaacctaacacgtggattttattgg
catggaaatgaaaattcaagttcaggtggcaatgaattttcctgcgacttgacctctaag
ctgcttcatctggcatggcatccaactacaaatatgattgcctgctcttctggaaatagc
ctgtacatgtattacgcgtag

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