KEGG   Ricinus communis (castor bean): 8289003
Entry
8289003           CDS       T01087                                 
Name
(RefSeq) serine/threonine-protein kinase ATM isoform X4
  KO
K04728  serine-protein kinase ATM [EC:2.7.11.1]
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    8289003
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:rcu01001]
    8289003
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rcu03032]
    8289003
   03036 Chromosome and associated proteins [BR:rcu03036]
    8289003
   03400 DNA repair and recombination proteins [BR:rcu03400]
    8289003
Enzymes [BR:rcu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     8289003
Protein kinases [BR:rcu01001]
 Serine/threonine kinases: Other
  PIKK family [OT]
   8289003
DNA replication proteins [BR:rcu03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    8289003
Chromosome and associated proteins [BR:rcu03036]
 Eukaryotic type
  Meiosis-specific proteins
   DSB formation-related proteins
    8289003
DNA repair and recombination proteins [BR:rcu03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    8289003
SSDB
Motif
Pfam: PI3_PI4_kinase FATC FAT TAN AAA_lid_PRS2_C
Other DBs
NCBI-GeneID: 8289003
NCBI-ProteinID: XP_015579454
LinkDB
Position
4:complement(26645272..26682999)
AA seq 3025 aa
MVTSRDVQEIVSKLSSDKAKAREEGIKLLNTWLEGERSIKFCNYIGQKTAKLKLNEIPHS
ETWPFLISLLIQSVSLEISTSKRRLPKASFAKTLRIVVQRAEDAKFSAGKVLPLLPVAKI
LFSHIWDVLSSVSSFQSEYGVILRHLLAVRDYRFHLRNRVYCSLMRLYIEKVETSLADKN
DNQGNLKEEAFRCVLTLHSLLENPPGDFPDELREDIVKGIVQIFSFIREEGKFSRKLMEC
VNTYLLKDGPNLGCQSLEIHNAVRHFVFRCWLTTHDRNLKDALIFYGRLQLNLTRGASES
GSMVEQFLDVVCKELDQSSLTSITVPWMDATKDEKFGTLTGSQCGLVELAALLLYQACVS
TPKAQSTEKRIKREHATVLLKEALKKGKWLWNAAFCYLIRNYCSRMNKDLIIYWFDGIST
SFERILNDTTMVHAYDSLLWTLRGLQELSTVLLLSDSRVDSISNKLDSGWQLIWSHLIHG
LPLFSNSTSVADAALLLLGNILTSDMMNIFVVPQDIWDLKLFKQMPSRCVLYFIACYFSH
KGSQGDLRDSLHLRKNLLTTILGYLNWKDTSILNEHMVVLFPAAVYALCAGCAPFTHCYK
GLLPSHNLEASGDWAKTYEDECERLYEPFECSVEVLAKIDLGSTVELASSQCNRSVSLPC
ELRDTLMHEMETHIFGALGDKQTEKMPLCDAIFTCGLLSNFIHGSLVTRKRDEILPFLSK
TGQYLIDLLGYAVNLVTENGSDFQSLGCSGSTSECNVKNSLLQSFRSLLCCPIFVKGEDK
NALDAALSGDVIQCMERLLKALAKLYEQFSECTRSSHSEVVLSDSSDASLQISSPLDGSR
SRILDVELDVNEDTQDVDILSFGGKVSTAISFSMIKWKMGMISLISSFFSVLGLVTWDIL
FEVMGKECETKVFENILYHLCQHPHWSSAGKLIDLVQTLDNMIEIKVGAKLNCASIVVAT
QRLMHTLLSLNGIQKDADLSLTGREHEQGLIHLGSVVSKVAEFGFLDWRGRVKLIGCICD
FVVLSPQNGQTMIGRLFLLLRDPDYRVRFSLAQRIGVLFETWDGHEELFQDIYSNFGVTL
VLHSKGKLVTAKEVLAAGPQPCLAMETIIITLMHLAFHSEKVELEAIFIICAVAAINPCH
RELVSAVLDDLSRQLQYATRFKYLEELIGTILFFWVSCGVSLVALVEIRQLFVLDAEPSY
FMQYCCHWLLPALVLNGDNSSMNWVAKLSSQPLAMLVKNHFVPIFSVCMALHCSKRPGWD
KGALVLQSSILHFAEISENERDKLIKQHMVSIVSHILSLASCASDPAVPFFPRDIVARAV
QTVVDGFLEMENYPSSVAVIDKINIFRPDRVFMFIVEMHYKIAAAVHHRHRYHKLAGIQV
LIDVLGHRAGVASTSNYLFNLVGQFIGCWALQDQCCRIISSLLETFKRNPSEDIVRVLGE
QLQFLVSKLVACCIPSETTKEASGTRSSQALSLLFQLTVHSDSSLHDYVRELEPFPETDI
FGEIRGFHQELCQAYSPRDHLLKFVNRSCYLPPRLLLWSVQALHKKLLMGENFQKERNTK
DFVEDVNWHCDPEIMQAVWALVRMCGSVDADSIRSLVSDFVSRVGIGDPHCVVFHLPGES
SYFNVCRPTANDSPTEINFSMDTVISEELLITLLKLLKKYLMDDSVRIVDLTSQALRGIL
STERGQGAILSFDSYERSLIEIHSKGVNVELVEKYLLDLERRFRAEAIPLEESTLWETPN
RTFEMWICPLVYSLIGYSNDIILRLCQDIVLLKAEVAELLLPSVIVDLAGKKKMDLDLHK
LISSQVQEHILTESNKLIKSIQVFLKALNELRLHYVLERSSAPSKRDTSKYAKPSSSASK
SRSTSAKARDAMAMSSAMTISTSSWDKVYWLTIDYLLVAKSAVICGSFFTSMMYVEYWCE
EYFNSLTLGRPDFSHLEVLPDHIEVLVSAVTQINEPDSLYGIIQSYKLPSQVVTFEHEGN
WSKALEYYDLQVRSNTMLQMNEGSRSLTVKHTQSPPHLSISESKDEIRHRKPYKGLIRSL
QQIGCTHVLDLYCQGLASQKGQVQHDLEFIELQYEAAWRAGKWDFSLLVMGSNSPPRQNI
KTDHFNENLHSCLRAFQEGDFDEFHTKLEGSKQELVQFISYASEESTEYIYSTIIKLQIL
YQLGMAWHIRWITSPCEMMEFRTQKHQSYTEPVFPTMDQLSWLNMNWSSILERTQLHMNL
LEPFIAFRRVLLQILGCNECSLQHLLQSTSTLRKGSRFSQASAALHEFKFLCIASGEQYL
SSYWLGRLEEAKLLHAQGQHEMAISLAKYISQNCHSNEEASDVYRMVGKWLAETRSSNSR
TILEKYLKPAVSLAEDQKATQKKSIERQSQTHFNLAHYADALFRSYEERLTSSEWQAATR
LRKHKTLELEALLRRLKSSAKGDKTDYSAKIQELQKQLTLDKEEAEKLLDDRDNFLNLAL
EGYKRCLVIGDKYDVRVVFRLVSLWFSLSSRQNVVTNMLTTIDEVQSYKFVPLVYQIASR
MGSSKDGMGPQNFQFALVSLVKKMSIDHPYHTLFQLLALANGDRIRDKQRSRNSFVVDMD
KILSARNLLDELSSYHGAVIGQMRQMVEIYIRLAQLETRREDTNKRMTLPREIRSVQQLE
LVPVVTASFPVDRNCNYSDGSFPYFKGLADSVVVMNGINAPKVVECFGSDGKKYRQLAKS
GNDDLRQDAVMEQFFGLVNTFLQNNRDTRKRRLGVRTYKVIPFTPSAGVLEWVNGTLPLG
EYLIGSTRNGGAHGRYGIGDWSFLKCREHMSNEKDKRKAFHEVCENFRPVMHHFFLERFL
QPADWFEKRLAYTRSVAASSMVGYIVGLGDRHSMNILIDQTTAEVVHIDLGVAFEQGLML
KTPERIPFRLTRDIIDAMGATGVEGVFRRCCEETLAVMRTNKEALLTIVEVFIHDPLYKW
ALSPLKALQRQKEMDDDLETSLEDSQEEYEGNKDAARALMRVKQKLDGYEEGELRSVHGQ
VQQLIQDATDADRLCQLFPGWGAWM
NT seq 9078 nt   +upstreamnt  +downstreamnt
atggtcacgtcaagagacgttcaagagatcgtctcaaagctctcctccgataaagccaaa
gcccgtgaagaaggaataaaattgttgaatacgtggttagaaggagaaagatcgataaaa
ttctgcaactacattggacagaaaactgccaagcttaagcttaatgaaattcctcactcg
gaaacatggccgtttcttatatcattgctcattcaaagtgtgtcattggagatttcaaca
agtaaacggcggttgcctaaggcgagttttgccaaaaccttgcgaattgtagttcagcga
gctgaggatgctaagttttcagcaggcaaggtattgccgttgttacctgtggctaaaata
ctcttcagtcacatatgggatgtattaagtagtgtttcaagctttcagtcagagtatggg
gttatactacggcatctattggcagttcgagattatcgtttccacttgaggaaccgtgtt
tattgcagcctgatgcgtctgtatatagagaaggtggaaacaagcttggcagataaaaat
gataatcaaggtaatctgaaagaggaggcttttcgctgtgtgttaacactacattcactt
ctagaaaaccctcctggagatttcccagatgaactcagggaagacattgttaaggggatt
gttcagattttctccttcataagggaggagggaaagttctcacgtaaacttatggagtgt
gttaatacttacttgttaaaagatggtccaaatttgggctgtcagtccttggagatccac
aatgctgtacggcattttgtgtttcgttgttggcttacaacccatgatcggaatctgaag
gatgcacttatattctatggaaggctgcagctaaatctaacaagaggtgcttctgaaagt
ggttctatggtagaacaatttttggatgtagtatgtaaagaactagatcaaagcagttta
accagcataactgtgccttggatggacgcaaccaaggatgagaagtttggaactttgact
ggttcacaatgtggtttggttgagcttgctgcactgctactttatcaggcttgtgttagc
acacctaaagcacagtcaactgaaaagaggattaagcgggagcatgctactgttctcttg
aaagaggcacttaagaaaggaaaatggttatggaatgctgctttttgctatctcattcgt
aactactgcagtcgcatgaataaggatcttatcatatactggttcgatggaatctcgact
agctttgagaggattttgaatgatacaactatggtgcatgcatatgatagtttgctctgg
actttgcgaggtttgcaggagttatctactgttttgctgctttcagattctcgagtggat
tcgatctcgaataagcttgacagtggttggcaattaatctggagccacttgatacatggg
ttgccattattcagtaattcaacttcagttgcagatgctgccttattgctactcggaaac
atacttacaagtgatatgatgaatatatttgttgtgcctcaagatatatgggacctgaaa
ttatttaaacaaatgccatcaaggtgtgtcttgtacttcattgcgtgctatttttctcac
aagggttctcaaggtgatcttcgagactccttacatctcagaaaaaatctcctaacaaca
attttgggctatctgaactggaaggacacttccatattgaacgagcatatggtggtgttg
tttccagcagctgtttatgctctttgtgctggctgtgctcctttcacacattgctacaaa
gggcttctcccatcacataatcttgaggcttcaggtgattgggccaagacatacgaggat
gagtgtgaaaggctttatgaaccttttgagtgctctgtggaggtgcttgcaaaaatcgat
ttgggctctacagttgagcttgcttcatcccaatgcaatcgaagtgtaagtcttccatgt
gaattaagagatacactgatgcatgaaatggagacccatattttcggagctctaggggat
aagcagaccgaaaaaatgcctctctgtgatgccatctttacatgtggactattgtccaat
ttcatacatggctcattggtaacaaggaaaagagatgagattttgccatttctctccaaa
acgggccagtacttaatagatttgttaggctatgctgttaatttggtcactgaaaatgga
agtgatttccaatctcttggttgttcgggatctacctcagagtgcaatgtgaagaactct
ttattacagtcttttagaagccttctctgctgtcctatctttgtaaaaggggaagataaa
aatgctctggatgctgcactttctggtgatgtgattcaatgcatggaaaggctcttgaaa
gcacttgctaaactgtatgaacaattttctgaatgtacaagaagctctcattctgaagtg
gtgctgtctgattcatctgatgcttccttacaaatatctagcccgctagatggtagtagg
agcaggattctggacgtggaattagatgtgaatgaggatacacaagatgtcgacatttta
agttttggtggcaaagttagtactgccatttccttttctatgattaagtggaagatggga
atgatatcacttatttcaagttttttctcagttttaggtcttgttacatgggatattctt
tttgaagtgatgggaaaagaatgcgagacaaaggtgtttgagaacattctttaccatctc
tgtcaacatccgcactggtcttctgctggaaagctcatagacctggtacaaacattggat
aacatgattgagataaaagtgggtgctaaacttaattgtgctagcatagtagttgccacc
caacggttgatgcatacgttattatctctgaacggcattcaaaaggatgctgacctaagt
ttgactggaagagaacatgaacagggtcttatacatcttggaagtgtggtcagcaaagtg
gcagagtttggctttcttgactggaggggacgtgtaaagctaattggttgcatttgtgat
tttgttgtactcagtcctcaaaatggtcagacaatgataggaaggttgttcttactgctt
cgggatcctgattaccgagttcggttttccctggctcaacggattggtgttctatttgaa
acatgggatggccatgaggaactcttccaagatatctattcaaattttggtgtcacactg
gtgcttcactcaaaagggaaacttgtcactgcaaaagaggttctagctgcaggtcctcag
ccatgcctagcaatggaaactattattattaccctaatgcatcttgctttccacagtgag
aaagtagaattggaggccattttcattatttgcgcagttgctgctatcaacccttgtcac
agggagttggtcagtgcagtacttgatgatctttcaaggcagcttcaatatgcaactagg
ttcaagtacttggaggaactcattggaactattctctttttttgggttagttgtggcgtt
agcttagttgcacttgttgagataaggcaactttttgtattggatgctgaacccagttac
ttcatgcaatactgttgtcactggcttcttccagctttagttttgaatggggacaactcc
agcatgaactgggtggctaagctctcttctcaacctttggcaatgctagttaaaaatcac
tttgtgccaatattttcagtttgtatggcattgcattgcagtaagaggcctggttgggat
aagggagctttggtgctccagagttcgattctgcattttgctgagatatctgagaacgaa
agagacaaactcataaaacaacatatggtatcaattgtgagccacattctgtcccttgct
tcttgtgcatctgatcctgcagtccctttctttcccagagatattgtagcacgggcagtt
caaacagttgtagatggatttttggaaatggagaattatccttcaagtgtagctgttatt
gacaagattaacatttttcggccagatagagttttcatgtttatagttgagatgcattat
aaaatagcagcagcagttcatcacaggcatagatatcataagttggctggaattcaggtg
cttatagatgtccttgggcacagagctggtgttgcaagcacttccaattaccttttcaat
ttggttgggcaattcattggttgttgggctttgcaagatcaatgttgtcgcataatttct
tcattgctggaaacatttaaaagaaacccatctgaagatattgtcagagtgctaggtgaa
cagcttcagtttttggtgtcaaagttggtggcatgttgcattccctctgaaactacaaag
gaagcttctggcactagatcatctcaagccttgtctttgctcttccagctaactgtgcat
tctgattcatctcttcacgattatgttagagaattggaaccattccctgagacagatatc
tttggtgagatacgagggttccatcaggagttatgccaagcctactctccaagggatcac
ttattgaagtttgtcaacagatcttgctaccttccacccagattacttttatggagtgta
caggcactgcacaagaagttgctcatgggggaaaactttcagaaggaaagaaacacaaaa
gactttgtggaagatgtaaattggcattgtgacccagaaattatgcaggcagtctgggca
cttgttcgcatgtgtgggtcagttgatgcagatagcattagatcattggtgtctgacttt
gtctctagggttggaattggtgatccacattgcgttgtcttccatctacctggagaatct
agttactttaatgtctgcaggcccacagctaatgacagccctactgaaattaactttagc
atggatactgtcatttctgaagaacttttgattacacttctgaagcttttaaagaagtat
ctgatggatgactctgttagaatagttgatttgacatctcaagcacttcggggaatactt
tcaactgaaaggggtcaaggcgctatattgtcatttgattcttatgaaagatctcttatt
gagattcactcgaaaggtgtaaatgttgagctggtggaaaagtaccttttggatctggaa
aggaggtttagagctgaagcaattccacttgaggaatctactttatgggagacacctaac
agaacatttgagatgtggatatgtcctcttgtgtactcattgattggctacagcaatgat
atcattctaaggttatgccaagatatcgttttgttgaaagctgaagttgcagagcttctt
ctgccaagtgttattgtagatctagccggaaagaagaaaatggacctagatcttcacaaa
ttaatctcttcgcaggtgcaggagcatatattaacagaatctaataagttgataaaatca
attcaagtcttcctgaaggcccttaatgaacttcgattacattatgtcttagaaagatct
tctgcaccatcaaagagagatacttccaagtatgctaagccatctagttctgcgtcaaaa
tctcgttccacctctgcaaaggctagagatgcaatggctatgtcaagtgcaatgacaata
tcaacgtcttcatgggacaaggtttattggctaaccattgattaccttcttgttgctaaa
tcagcagttatttgtggctcattctttacctctatgatgtacgtggaatactggtgtgaa
gaatattttaatagcctgactctagggagaccagatttctcccatcttgaggtgttgcca
gatcacattgaagtacttgtctcagcagtcactcaaatcaatgaacctgatagcttatat
gggataatccagtcatacaagctgccctctcaagttgttacctttgagcatgagggaaac
tggagcaaggcccttgagtactatgacctgcaagtacgttcaaataccatgctgcaaatg
aatgaaggatctagaagtttgacagtaaagcatacccaatcaccaccacatctatccatc
tccgaatcaaaagatgaaataaggcacaggaaaccttataaaggtctaattagatctctt
cagcaaattggttgtacgcatgtgctagatttgtattgccagggattggcttctcagaag
ggtcaggttcagcatgatttggagttcatagaattgcagtatgaggctgcttggcgtgca
ggaaaatgggatttctccttgctcgtcatgggaagcaattctcctccacggcaaaatatc
aagactgatcatttcaatgaaaatttgcacagttgtctaagggcatttcaagagggagat
tttgatgaatttcacactaaactggaaggttcaaagcaggagcttgtgcagttcatctct
tatgcaagtgaggagagcactgaatacatctattcaacaataattaaacttcagattctt
tatcaacttggtatggcatggcatatacgatggataacatctccatgtgaaatgatggaa
tttcgtactcagaagcaccaaagttatacagaacctgtgttccctaccatggatcagtta
tcatggttgaatatgaattggagctccattttggaacgaactcagctgcatatgaattta
ttagaaccattcatagcattcaggcgagttctacttcagatcttgggttgcaatgagtgt
tctttgcaacatcttttgcagtccacatccactctccgcaagggttcaaggttttctcaa
gcttctgccgctctacatgagtttaaatttctttgtattgctagtggtgaacaatattta
tcttcctattggcttggaaggctggaagaagcaaagctgttgcatgcccaaggtcagcac
gagatggctattagccttgcaaaatatatctcacaaaattgtcactcaaacgaagaagct
tcagatgtgtatcgtatggttggaaagtggctagcagaaactagatctagcaactcaagg
acaattttggagaaatatctaaaacctgcagtttccctggcagaagatcagaaggctact
cagaaaaagtcaatagaaagacaaagccaaacacattttaatcttgcacactatgcagat
gctttatttaggtcctatgaggaaagattaacttctagtgaatggcaagcagcaacgcgt
ttgaggaaacacaagacactggagttggaggcacttcttagacggcttaaaagttcagca
aagggggacaagactgactattcagctaaaattcaagagttgcagaagcaacttacattg
gacaaggaagaggctgaaaaactgctggatgacagggacaattttctcaacctagcattg
gagggatacaagcgatgtctggtcataggtgacaagtatgatgtacgagtggtgtttcga
cttgtttccctgtggttcagtctctcttctagacaaaatgttgtgactaacatgcttacc
actattgatgaggttcagtcatataaatttgtcccgttagtttatcaaattgcttcaagg
atggggagctcaaaggatggaatgggacctcaaaattttcagtttgctttggtttctctt
gtgaagaaaatgtccatagaccatccataccacacactttttcagcttctagctctagca
aatggtgaccgtatcagggataaacagcgcagtagaaattcatttgtcgtggatatggat
aaaatactttcagcaagaaatcttctggacgaattatcatcatatcatggagctgttatt
ggacaaatgagacaaatggttgagatctatatcagacttgcacagcttgaaacaaggaga
gaggataccaacaaaaggatgacattaccaagggaaatccgcagtgttcaacaactagaa
cttgtacctgtagtgacggctagtttcccagtggatcgtaattgtaattacagtgatggc
tccttcccatactttaagggactagcagattcggttgtggtaatgaatggtattaatgcc
ccaaaagtggttgagtgctttggttctgatggtaaaaaatatcggcagctagcaaaatct
ggaaatgatgacctcagacaagatgctgttatggaacaattttttggtctggttaacaca
tttttacaaaataatagagatacacggaagagaagattaggtgtgcgtacatacaaggtt
attccttttactccaagtgctggtgttcttgaatgggttaatggcactcttccccttgga
gaatatcttataggaagcacaagaaatggtggtgctcatggtcgctatggaattggagac
tggtcatttctcaaatgcagagagcatatgtcaaatgaaaaagacaagcgtaaagcattc
catgaagtttgtgagaacttcaggcctgttatgcatcacttttttctggagagattcttg
caaccagctgactggtttgagaagagacttgcatacacacgtagcgtggcagcaagttct
atggtgggctatattgttggccttggagacagacattcgatgaatatcttgattgatcaa
accactgcagaagtagttcacatagatcttggtgttgcttttgaacaaggcttgatgctc
aagacaccagagcggattccattcagactgacaagggacataattgatgccatgggtgca
actggagtagaaggtgtcttcagaagatgctgtgaagaaactctggctgttatgagaaca
aataaagaagcactactgaccattgtcgaagtatttatccatgaccccttgtataaatgg
gctttatcccctttgaaagccttgcagcgccaaaaggaaatggatgatgatctagagaca
agtttggaagactctcaagaagaatatgaagggaacaaagatgctgcacgggcgttgatg
cgcgtcaagcaaaaactagatggatatgaagaaggtgaattgagaagtgtgcatggacag
gttcaacagcttattcaagatgccactgatgctgaccgtttatgccaactgtttcctgga
tggggagcttggatgtaa

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