Ricinus communis (castor bean): 8289095
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Entry
8289095 CDS
T01087
Name
(RefSeq) uncharacterized protein LOC8289095
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rcu01002
]
8289095
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcu04121
]
8289095
Enzymes [BR:
rcu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
8289095
Peptidases and inhibitors [BR:
rcu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
8289095
Ubiquitin system [BR:
rcu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
8289095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
8289095
NCBI-ProteinID:
XP_002527676
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All DBs
Position
5:28558956..28572950
Genome browser
AA seq
1283 aa
AA seq
DB search
MASENFTDKNVVFRKLKAKSDNKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHIS
FVRSTNLDSWSPEQLKVMSFGGNNRAQAFFKQHGWTDGGKIEAKYTSRAADLYRQILSKE
VAKSMAEDAGLPSSPVASQSAQASNGFPDVKTNESPEESSLGKQETPDVPPPPKVSHPII
TSTVKKPLGAKRTGKTGGLGARKLTTKPSESLYDQKPEEPPLPVPAATNNTPKAGTSFTS
RFEYVDNVQSTELISGGPQVISHVSPPKSSSFFAEFGMDSGFQKKSSNNSSKVQIQETDE
ARKKFSNAKSISSAQFFGDQNKATDIDSQVSLQKFSGSSAISSADLFGDSSDHSIDLAAS
DLINRISFQAQQDISSLKNIAGETGKKLSSLASTLITDLQDRILNLKKQFGFSKIETQIV
EPKQVSLLALTSLSNLLRYFFAKITKLAIFIVQYSMVIKALNPSISPNNRSPILPLVAIS
TETIDGSLSSLYPKTLNTVGFSSSLPVETVHIEAMGLSPSNCNESSSISIMIDDSDKTLT
ESLPSPQTEGLADGIDQSFIGTQNCDSVVSTNGNDQSSPGGYVDDMCLVPVSVIPREARN
DNNGDCSAPKPAMKVDAKEGTSENENNLEANGLLPDYPYDNSCNCNNLFNPYYGFQQQWP
GPCGPLCEYQYSRFYGPRHHSRERWGNGEDEEDMPCWRSVQETVPTGVAAGLYNLGNTCF
INAVLQSFTHTVPLVKALRSCNHVMPCQRGVEGFCAVCALRDHIELSLTSSGKAVSPSKI
VDNLKQISSCFEKYQQEDAHEFLQCLLDKLERCCLDPGLSDEASSSPENNIVERVFGGRL
VSKLRCCNCGHCSDKYEPLIDLSLEIEDVGNLQSALESFTKVEKIEDVDSKFICNHCKEE
GSREKQLMLDQAPSVSALHLKRFKTDGSFIEKIDKHVEFPLELNLKPYTKSSQDCNKNQV
DLKYQLYAIVVHNGLSPTSGHYFCFVRSSPSTWHKLDDCRVVKVEEEEVLSQAAYILFYV
RDGTPWFSSLIELEKDSSDPSISNTSPKSVLDRMVTGSTACPLWENFDQCKAESLDHHKS
SVSISDVEKTSNHFSCVTVVEKDEINAIGNGAEGISAQILCGSGNSGPKLCYESSRADVS
MTDVSVSLEATNSHEILHDEKLGQGAGTSGRNDVDPLMPPRSSSPDLNFGGVPSAKKHIR
RDHLKVERLIDFKKPKKAMRNHREEALRYVSKNMAASRRSKLIDAILPQNDKKRRLRSSS
SSCKQASPPGARSKISQRSAVLH
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgagaacttcaccgacaaaaacgttgttttcagaaagctaaaagccaaatct
gataataagatgtgctttgactgtaatgcaaaaaacccgacttgggcatctgtgacttat
gggattttcctctgcattgattgctccgctgttcatcgtagcctcggcgtgcatatcagc
ttcgtcaggtcgacaaatttagattcttggagtcctgagcagttgaaagtgatgagcttt
ggaggaaataaccgagcacaggctttctttaagcagcatggatggactgacgggggaaaa
atcgaggccaagtatacatctagagctgctgacttgtacagacaaatactttcaaaagaa
gttgccaaaagtatggcagaagatgctggattgccatcatcacctgttgcttctcagtca
gcccaagcttccaatggatttcctgatgtcaagaccaatgagtctcctgaagaaagttca
ttaggaaagcaggaaacacctgatgttcctcctccccctaaagtttctcatccaattatt
accagtacagtcaagaagccgcttggtgcaaagagaacaggaaagaccggaggtcttggt
gctaggaagcttactacaaagcccagtgaaagtctctatgatcagaaaccagaagaacca
cctcttcccgttcctgctgcaactaacaacactccaaaagctggcacatcttttacatct
cgttttgaatatgtggacaatgtccaatctactgagctaatttctggtggtccgcaagtg
attagccatgtatcacctccaaagtcatcaagcttctttgcagaatttggaatggatagt
ggctttcagaagaaatcaagtaataactcctcaaaagtgcagattcaggaaacagatgaa
gcaaggaagaagttctcaaatgcaaaatcaatctcatcagcacaattctttggtgatcaa
aacaaagccactgatattgattctcaagtttccttgcagaaattctctggttcatcggct
atctccagtgctgatcttttcggtgacagcagcgatcactccattgatcttgctgcaagt
gaccttatcaaccggatatctttccaggcccaacaggatatttcttccctcaagaatatt
gcaggagagactgggaagaagctgagctccttggcgtccactttgatcactgatcttcag
gatcgaatcctcaatctcaaaaaacaatttggattttcaaaaattgaaactcaaatcgtg
gagccaaaacaggtttccttactggctctcacgagtctcagtaatcttcttagatacttc
ttcgcaaaaatcactaaactcgcaatctttattgttcagtactctatggttattaaggcc
ctaaatccttcaatttcaccaaacaaccgttccccaattttacccttagtggctatttca
actgaaactattgatgggtctttatcatcattgtatcctaaaaccctaaatactgttggg
ttttcttcgtccttaccggtggagacggtacatattgaggctatgggtctttcaccatca
aattgtaacgagtcttcatcaatttcaattatgattgatgattctgacaaaaccctaaca
gagtctttgccttctccacaaactgaaggcctagcagatggtatcgatcaatcttttatt
ggcacccaaaattgtgattctgttgtttctactaatggtaacgaccagtcttccccgggg
ggatatgtagatgacatgtgtttggtccctgtatctgtcattccaagggaagctcggaat
gataataacggcgattgcagtgctcctaagccagctatgaaagtagatgctaaagaaggc
acttccgagaatgaaaacaatcttgaagcaaatggattacttcctgattacccatatgat
aattcttgcaactgtaataatttattcaatccatattacgggtttcaacaacaatggcct
gggccatgtggtccattgtgcgaataccagtattcgcggttctatggcccacgccatcat
tcaagagaacgctggggaaatggagaggatgaagaagatatgccttgctggcgttctgta
caagaaactgtacctactggggtggctgcggggctgtataatcttgggaacacatgcttt
attaatgcagtcctacaaagttttacgcatactgtgccacttgttaaggctctccgttct
tgcaatcatgtgatgccttgccagcgtggtgttgaaggattttgtgccgtctgtgctctt
cgagatcatattgaactttctttaacctcttctggaaaagctgtatcaccttccaaaatt
gttgataatttgaaacagatttcatcttgttttgagaaataccagcaggaagatgctcat
gaattccttcaatgcttattagataagcttgaaaggtgttgtctggatccaggtctgagt
gacgaggcatcatcttccccagagaataacatagttgagcgggtatttgggggtcgcctt
gtaagcaaattgcgatgttgcaattgtggtcactgttctgataagtatgaaccccttatt
gacctgagtttggagattgaagacgtgggaaatcttcaaagtgctttagagtctttcacc
aaggtagagaaaattgaagatgttgattcaaagtttatatgcaaccactgtaaggaggag
gggtccagggagaagcagcttatgcttgaccaggctccttctgtatctgctttgcattta
aagagattcaagactgatggatccttcattgaaaagattgacaaacatgtggagtttcca
ttagaattgaacttaaaaccctacaccaaaagcagtcaagactgtaataagaaccaggtt
gacttgaagtatcaactttatgcaatcgtggtgcataatggattgtcacccacttctggg
cattacttttgttttgttcgatcctctccaagcacatggcataagctggatgactgcagg
gttgttaaagttgaagaagaggaggtgttatctcaagctgcctacattttgttttatgtt
agagatgggacaccctggttttccagtttgatagaactagagaaggattcctcggatcct
agcatttcaaatacttcacccaagtcagttctagatagaatggtgactggatctacagca
tgtcctctctgggagaattttgatcagtgcaaagctgagagtcttgatcaccacaaatcc
agtgtatctatcagtgatgttgagaagacttcaaatcacttctcttgcgtgacagtggtt
gaaaaggatgaaatcaatgcaattgggaatggggctgaggggatttctgctcagattttg
tgtggatctggaaacagtggaccaaaattatgctatgagtcgtccagggctgatgtttca
atgactgatgtttctgtgtcacttgaagccacaaattctcatgaaattttacatgatgag
aagttaggtcagggcgctggcacatctggaagaaacgatgttgatcccctaatgccacct
agatcatcaagtccggatctgaattttggaggggtgccaagtgccaaaaaacatatcaga
cgagatcatttaaaggtggagcgtttgatagatttcaaaaagccaaaaaaggccatgagg
aatcatagagaagaagctcttagatatgttagtaagaatatggctgcatcgaggcgctcc
aaacttattgatgctatacttccccaaaatgacaagaaaagaagactaagatcatcatca
tcatcatgtaaacaggccagccctcctggtgctcgctctaaaatctctcaacgttctgca
gttttgcactga
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