Ricinus communis (castor bean): 8289179
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Entry
8289179 CDS
T01087
Name
(RefSeq) flap endonuclease GEN-like 1 isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcu03400
]
8289179
DNA repair and recombination proteins [BR:
rcu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
8289179
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
Chromo_2
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
8289179
NCBI-ProteinID:
XP_002511787
UniProt:
B9RDJ8
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Position
1:1541555..1545127
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AA seq
609 aa
AA seq
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MGVGGKFWDILKPYTRHEGPDFLREKRVAIDLSYWIVQHETAIKSYARKPHLRLTFFRTI
NLFSKFGAFPVFVVDGTPSPLKSRARISRFFRSSGIDSSVLPTPEEGVSVERNGAFLKCV
KECVELLELFGMPVLKANGEAEALCAQLNSQGLVDACITADSDAFLFGAKCVIKSIKPNS
KEPFECYQMSDIESGLALKRKHLIAIALLVGNDHDLNGVQGIGVDTALRFVQTFHEDEIL
NCLREIGKGNTNIFLGVSRVVEDLMIDPHENSLKSKISHCSFCGHPGSKRAHFKSSCEYC
GNSNGEGCTKKSGAFRCNCGSCNKDRKAKEEQKRENWQIKVCDKMFMEPNFPNDDIIEMY
LCNNHAEFTEDDDTCLSWGSPNTDMLVDFLAFHKLWHPSYIRQRILPVLSTIYLRDMAAK
PEKALLYGQYEFDSIQRIKVRYGHESYVIKWKKAANTISSNICINIVEELDKHQEDIVKT
DESIDQLEEYNVPKSYVDDGCWFLLTDENMDLVQNAFPDAVDKFLKEKEQKESKRRLSSS
TEKSESVKSKGVQLNITEFYRSTKVQFAASGGEEQADCSENQDDVISTEKRKISSSNLPK
SVRRRLLFK
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgggaggcaaattctgggatatactaaaaccctatacccgacacgaaggaccc
gatttcttgagagaaaaacgggtcgccatcgatctttcctattggattgtacaacacgaa
accgccattaaatcctatgcacggaaacctcatctccgtcttaccttcttccgtaccatc
aacctcttctctaagtttggggcattccctgtttttgttgttgatgggactccctcgcct
ctgaaatctcgcgccagaatttcgcggttttttcgttcttccggcattgattcttccgtt
ttaccgacacctgaagagggtgtctcggttgagaggaatggggcatttttgaaatgtgta
aaagagtgcgtggaattgcttgaattatttgggatgcctgttttaaaagcaaatggtgaa
gctgaagcgttgtgtgcccagttgaatagtcagggccttgtagatgcttgtatcacagct
gatagtgatgccttcttgtttggggctaaatgtgtgatcaaatccatcaagcctaactca
aaagaaccatttgaatgctaccaaatgtcagatattgaatctggtcttgcgttgaagaga
aagcatttgatagccattgctttgttggtcggaaatgaccatgatctaaatggagtacag
gggattggagttgatacagctcttcgttttgtccaaactttccatgaagatgagatattg
aattgcttacgtgaaataggcaaaggaaacaccaacatatttcttggtgtttcaagggtc
gttgaagatcttatgattgatccacatgagaactcattaaagtcaaaaatctctcactgc
tccttttgtgggcatcctgggagtaaaagagcacattttaagtcttcttgtgagtactgt
ggcaacagtaatggtgagggttgcacaaaaaagtcaggggcgttcagatgtaattgtggc
agctgtaacaaggatcgcaaagctaaggaggagcaaaagcgtgaaaattggcagataaaa
gtttgtgacaagatgtttatggagccaaattttccaaatgatgatatcattgaaatgtat
ttgtgcaacaatcatgcagagtttactgaggatgatgacacatgtttatcatggggaagc
ccaaacacagatatgctggtcgatttcttggcttttcataagctgtggcatccgtcttac
attcgacaaaggattcttcctgtgttgtccaccatttatttgagagatatggctgcaaag
ccagagaaagcattgctgtacggccaatatgagtttgattctattcaacgtatcaaagta
agatatgggcacgaatcttatgtgatcaaatggaaaaaagctgccaacaccattagcagt
aacatctgcataaacattgtggaagaattggataagcaccaagaagacattgtgaaaact
gatgagtccattgatcaattggaagagtacaatgtcccaaaaagctatgttgatgatggg
tgttggtttttgttgactgatgaaaatatggatcttgttcaaaatgctttcccagatgca
gttgacaaatttttaaaggagaaggaacagaaagaatcaaagagaaggctctcatcctcc
acagaaaagtcagaatcagtgaagtcaaaaggtgtccaactgaatataacagagttttac
cgatccaccaaagtacagtttgctgcatccggaggagaagagcaagctgattgttctgaa
aatcaagatgatgtgatatctacagaaaagaggaaaatctctagttcaaaccttccaaag
tctgtgagacgccgccttttgttcaagtag
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