Ricinus communis (castor bean): 8289627
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Entry
8289627 CDS
T01087
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
8289627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rcu03041
]
8289627
Spliceosome [BR:
rcu03041
]
Complex A
Other components
Complex A specific factors
8289627
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
eIF3g
PHD_4
KH_PNO1_2nd
zf-CCHC
RRM_7
Motif
Other DBs
NCBI-GeneID:
8289627
NCBI-ProteinID:
XP_002510980
UniProt:
B9R9V5
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All DBs
Position
4:29001471..29005420
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AA seq
798 aa
AA seq
DB search
MDSLNHQFQSFDPSQPPPPETLDSHFENHPPPPPPQDESQILDSQNLDRTLNGNAQTILN
NGNDTALKIPKPLLSENGLTNTNSGDRDFSGGEEETTSRRRRRSRWDPPADSTANSNSNN
NSQSTDANNSDSGTGGTTRKRKSRWADDEPKPTIQLPDFMKDFTGGIEFDPEIQALNARL
LEITRLFQSGMPLDDRPEGARSPSPEPIYDNMGIRINTREFRARERLTKERQDILTQMIK
RNPAFKPPADYRPPKLQKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMERETGAKIVIRGK
GSVKEGRLQQKRDLKPDPSENEDLHVLVEAETQEALDAAAGMVEKLLQPVDEVLNEHKRQ
QLRELAALNGTIRDEEYCRLCGEQGHRQYACPSRTTTFKSDVLCKICGDGGHPTIDCPVK
GTTGKKMDDEYQNFLAELGGTMPESSTKQTATLALGPGSSGSNPPWSSSNTGGLGSANQA
GGLGANGVKPIKEYDDTNLYIGYLPPNLDDDGLIGLFSAFGDIVMAKVIKDRVTGVSKGY
GFVKYRDIQMANNAIASMNGYRIDGRTIAVRVAGKPPQPTVPPGPPASTMPAYPIASQPV
GAYPSQQFTPGGPLPNAPPAGYAGPPASYGGAPVPWGPPVPPPYAPYAPPPPGSTMYPPV
PGQPMPPYGYPPPVQPAPSGAPTPTVTSSEAQQSYPPGVQSENSTSAPPSSSNIYCSSVA
VPSGAQPAYVTASLGYSSYYNAVPPPPPAPASTGDHTQGISNVPWAPNPPLPPPVSSSSE
KTAYGADSEYEKFMAEMK
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggattccctaaaccatcaatttcaatctttcgatccttctcaacctcctccaccagaa
accctagattcccacttcgaaaaccaccctcctcctccacctccacaagatgaatctcaa
atcctcgattcccaaaacctagacagaaccctaaacggaaatgcccaaaccatcctcaac
aatggcaacgacaccgctcttaaaattcccaaacccttgctatcagagaacggtctcacc
aatacaaacagcggcgacagagatttctccggaggcgaagaggagacaaccagccgtcga
cgtagacgcagccgatgggacccgccggctgattccaccgccaacagtaacagtaataat
aatagtcaatccactgacgccaataatagtgattccggtactggtggtactacacggaaa
cgaaaatcgcggtgggctgatgatgagccaaaaccaacgattcagcttcctgattttatg
aaagattttactggaggtattgaatttgaccctgaaattcaggctttaaatgctaggctt
ctagaaattactagactgtttcaatcaggtatgcctttagatgacagacctgaaggagct
aggtctccttctcctgaaccaatttatgacaacatgggaattagaatcaacactagagag
tttagggctagagagagattgaccaaagagagacaagatatccttactcagatgatcaag
agaaaccctgcttttaagcctcctgctgattacaggccgcctaagcttcagaagaagctt
tatatacccatgaaggaatatccagggtataattttattggtttgattattgggccaaga
ggaaatacacagaagagaatggagagagaaacaggagcaaaaattgttattcggggtaaa
ggatcagtcaaggaagggaggttgcagcagaaaagggatttgaaacctgacccatcggag
aatgaagacttgcatgttttagttgaggctgaaacacaggaggctttggatgctgctgca
gggatggtggagaagttgttgcagcctgttgatgaagttttgaatgaacataagaggcaa
cagcttagagaacttgctgctttgaatggcacaataagggatgaggagtattgtaggttg
tgtggagagcaggggcatagacagtacgcctgtccttcacgtactactacatttaagagt
gacgtgctttgtaagatttgtggggatggtggacatccaacgattgattgtcctgttaag
ggaacaacaggaaagaaaatggatgatgagtatcaaaactttttggccgagttaggtggg
actatgccagaatcctcaactaagcaaactgctacccttgccttgggtccaggtagttct
ggaagcaatcctccctggtctagtagtaatacaggcggtcttggtagtgcaaatcaagca
ggaggactaggagcaaatggagttaaacctattaaagagtatgatgataccaatttgtat
attggctatctgccacctaatcttgatgacgatggtttgattggtttgttctccgctttt
ggtgatatcgtgatggctaaggttattaaggaccgggtcactggagtgagcaagggttat
ggttttgtgaagtaccgtgacattcaaatggctaataatgctattgcaagcatgaatggt
taccgtatagatggccgaactattgctgtgagagttgctgggaagccaccccagcccact
gttcctccaggccctcctgcatcaactatgcctgcatatcccattgcatctcagccagtt
ggtgcttatccatcacagcagtttaccccaggtggtcctcttccaaatgcaccacctgct
ggctatgcaggtcctcctgctagctatggcggagccccagttccttgggggccgccagtt
cctcctccctatgcaccttatgcccctccccctcctggatccacaatgtatcctcctgta
ccaggacagcctatgcccccttatggttatcctccaccagtacagcctgctccctcaggt
gcacctactccgacagtgacttccagtgaagctcagcaaagctacccaccaggagttcaa
tctgagaacagcacctctgctccaccgtcatcatcaaatatctattgcagttctgtagca
gtaccttctggtgctcaacctgcatatgttactgcttcattaggttactcatcttattac
aatgcagttcctcctccccctcctgcacctgcttcaacaggtgaccatacccagggcatc
agtaatgtgccttgggctccaaatcctcctctgcctcccccagtttcctcttcttcagag
aaaacagcctatggtgcagattcagagtatgagaagttcatggcagagatgaaatga
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