Ricinus communis (castor bean): 8289806
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Entry
8289806 CDS
T01087
Name
(RefSeq) zinc finger CCCH domain-containing protein 41
KO
K13192
RNA-binding protein 26
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rcu01009
]
8289806
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8289806
03041 Spliceosome [BR:
rcu03041
]
8289806
Protein phosphatases and associated proteins [BR:
rcu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
8289806
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
8289806
Spliceosome [BR:
rcu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
8289806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_Nup35
zf_CCCH_4
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
8289806
NCBI-ProteinID:
XP_048229581
LinkDB
All DBs
Position
5:complement(30462893..30470859)
Genome browser
AA seq
962 aa
AA seq
DB search
MELKVASVKPGGLSPSDCASDPEEKEISDEDDDDRNHKHRRRETRSQSTERDSLEPIFTR
SYRKRNKPFENGHPFRENESQGSETWKNSNIAPLEKDFIKFDKRRPGMASFPRMNVDLNQ
RIRSNQIFFGEPGPGRGRGRDSGSWNQRDSRFSSVDIASQMVQQGSITPGLFAGRGLPNV
SNTQNSSWNTFGLIPGIPSGGLDTLHPIGLQGTLRPAVNSSLNIGIPRQRCRDFEERGFC
LRGDMCPMEHGINRIVVEDVQSLSQFNLPVSLPSAPLVGTPAGPGALQSVGASSTTLMNS
KGLHSRNSKSGMVDDGMGFNGAYSVSAAGSGADLYDPDQPLWNTNGPETSSGLLALHSSK
NDETESFMSVGTSDHHHGRLRDNADNECGMRNTAIPDGSQTTSSSVWGRVGSVKNRLDMK
EKTDLTVSTSDYLENETKEDQDALANIQGTSRQGKRMISEDSGPKTLDFSTKTQGDSMRN
TRKSSQKALCTLFVSGIPQKNNKRDSLLSHFQKFGLVIDIYIPSNSERAFVQFSRREEAE
AALRAPDAVMGNRFIKLWWANRDSIRGDGISSCQSISATPCGVPGASVPPQPFIANRGKD
NLQSAASKGATVPPPDASLPPTDHPKPVITNGPKVPPPLQKKLELEQLKEELRKKQELLA
QKRNDFRRQLDKLEKQATGVKGEVVVEPAAKRHRVGMATDIVKVPTLRSSGHVLGVPSPR
GENKSFENPMSSSPKNNASLMQQETTGSRQPIRPVGPAGAPFSVNRFKLDNRQIYGGCVD
VLKEHFSSYGDLSTVELEDAEACDDNDGSEVPKKSCSALLTYATRRSAERAFLNGKCWQG
KDLQFMWVTCSTSASDLSGRENISSASKCPIETGVQPAGKIDHMDSQEASASGNGEPEAS
ERNSSDDHEVSTPCPTLVPSENESSKCDASAMSMSSKEESLKSEIGPTAISEEKESPTSG
AY
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggagctcaaagttgcatcagtgaagccaggaggtctttctccttctgattgtgctagt
gatcctgaggagaaggagatcagtgacgaggatgatgatgatcgcaatcataagcatcgt
agaagggagactcgttctcaatctacggaaagagattctttggagccaatttttacaagg
tcatacaggaagcgcaacaagccatttgaaaatggtcatcctttcagggaaaatgaatct
caaggtagtgaaacctggaaaaacagtaacatcgctcctctagagaaagacttcataaag
tttgataaaagacgccctggtatggcatcatttccccgaatgaatgtggatttgaatcaa
agaatcaggtcaaaccaaatattttttggagagcctggtcctgggaggggaagaggaagg
gactcaggttcttggaaccaacgtgactccaggtttagctcagttgacattgcttctcaa
atggttcagcagggatccatcactccaggtctctttgcaggaaggggattgccaaatgtt
tcaaacacacaaaactcatcctggaatacatttggattgattccaggaatacccagtggt
ggccttgatacacttcatcccattggtttgcaaggaaccctcagaccagctgtaaattct
tcactgaatattggcattcctcgccaacggtgtagggactttgaagaacgtggattttgc
cttagaggggacatgtgcccgatggagcatggcatcaatcgtattgtcgttgaagatgtt
cagagcctttcacagttcaatctccctgtttcacttccaagtgcaccgctagtgggaaca
cctgcaggaccaggggctttacaatctgtgggtgcttcttcaaccacattgatgaatagc
aaaggattacatagcagaaatagcaagtctggaatggttgacgatggtatgggcttcaat
ggtgcatattcagtttctgctgctggaagtggagcagacttgtatgatccagatcagcca
ttgtggaataccaatggtcctgaaacatctagtgggctcttagcattacactcatccaaa
aatgatgaaactgagtccttcatgagtgttggtacttctgaccatcatcatggcaggttg
cgtgacaatgctgataacgaatgtggaatgagaaatactgcgatccctgatggttcacag
actacaagctcatccgtttggggtagagttggtagtgtgaagaatagattagacatgaaa
gagaaaacggatttgactgtaagtacctcagattatttagagaatgaaactaaggaagat
caggatgctctagccaatattcaagggacttctcgtcaaggaaagcgaatgatttctgag
gattctggccccaaaactctggatttttcaaccaagacacagggtgattccatgcgcaat
acaagaaaatcgtctcaaaaggcactatgtacactatttgtcagtggcattccacagaaa
aacaacaagagggattctcttctttctcattttcaaaagtttggattggttatcgatatt
tatattccatcaaatagcgaacgagcttttgttcagttttcaagaagggaagaagctgaa
gctgctcttagggcacctgatgctgtaatgggcaaccgctttatcaagctatggtgggcc
aatcgtgacagcattcgtggtgatggcataagtagttgccaaagcatttctgcaactccc
tgtggtgtgccaggtgcttcagttccgccccaaccttttattgctaatagaggaaaagat
aatctacagtctgctgcttctaagggtgctacagtccctccccctgatgcgtctctgcct
cccaccgatcaccctaagcctgtcatcactaatggtccaaaggttccacctcctttgcag
aagaagttggagttagaacaattaaaggaggaactgcgcaagaagcaggagctgctggcc
caaaagcgaaatgattttcggcgccagttggacaaacttgagaaacaagctacaggagta
aagggtgaagtagtggttgagccggctgccaagagacatagagtgggaatggcaactgat
attgtaaaagttccaactctgaggtcctctggtcatgttcttggtgttccatctccacgt
ggtgagaacaaatcatttgagaatcccatgtcatctagtcccaaaaataatgcatcgctg
atgcagcaggaaactacaggctcaaggcagccaattcgtccagtgggccctgcaggggct
cctttttctgtgaatagattcaagttggataaccgacaaatttatggtggatgtgtagat
gttttgaaggaacacttctcatcctatggtgatctttctactgttgaactagaagatgct
gaagcctgtgatgataatgatggatcagaggtaccgaaaaaaagttgctcagctcttctg
acttacgcaactcggcgttcagctgagagggcatttttaaatggtaaatgctggcaaggg
aaagatttgcagttcatgtgggtgacatgtagtacctctgccagtgacctttctggcaga
gaaaatatatcatctgcctccaagtgtcctatagaaactggtgttcagcctgctggaaaa
atagaccacatggattcccaagaagcttctgcatctggaaatggggaacctgaagcttca
gaaagaaatagcagtgatgaccatgaagtttccacgccgtgtccaactttagtacctagt
gagaatgagtcatctaaatgtgatgctagtgcaatgtcaatgtccagcaaggaagagtcg
ctaaaaagcgagattggtccaactgcaatatctgaggagaaagagtcgcctacaagtggt
gcctattga
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