Teichococcus cervicalis: PFY06_05085
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Entry
PFY06_05085 CDS
T08750
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
rcv
Teichococcus cervicalis
Pathway
rcv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rcv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PFY06_05085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcv03019
]
PFY06_05085
03009 Ribosome biogenesis [BR:
rcv03009
]
PFY06_05085
Enzymes [BR:
rcv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
PFY06_05085
Messenger RNA biogenesis [BR:
rcv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PFY06_05085
Ribosome biogenesis [BR:
rcv03009
]
Prokaryotic type
rRNA processing factors
PFY06_05085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
TMEM106_N
Motif
Other DBs
NCBI-ProteinID:
WBV43946
LinkDB
All DBs
Position
1048826..1052047
Genome browser
AA seq
1073 aa
AA seq
DB search
MTKRMLIDASHAEETRVVVLDGNRLEEFDIETENKRPLKGNIYLAKVVRVEPSLQAAFVE
YGGNRHGFLAFGEIHPDYYQIPVADRERLLALQAEEAQDEEEDEVSEAEADEMVAAIERM
ADADEAGEGQPEQGEPRSQAMASGESRSASPEELLAAEAAAAEATVPHEGVAIGEPADGP
APELPAEAAEDPENPPETLGGRGKEESDDNGREERRIPPRFLRHYKIQEVIRRRQIMLVQ
VVKEERGNKGAALTTYISLAGRFSVLMPNSPKGGGISRKITSIADRKRLREAIDELNMPR
GMSMIVRTAGAGLPKPEIRRDCEYLLRLWDDIRERTLQSTAPALIYEEADLIKRSIRDVF
GRDIEEIQVEGEGAYRQARDFMRMLMPQNERKIRLYRDATLPLFARHGVDAQLDAMMSPT
VQLKSGGYIVINQTEALVAIDVNSGRATRDRHIEDTALRTNMEAAEEIARQLRLRDLAGL
IVIDFIDMESPRNDAQVERRLKEALKHDRARIQVGRISHFGLLEMSRQRLRPSLTEHSFI
TCPHCQGLGIVRSPESAALQVLRQIEEEGAKRRAAEIQVSIAPDLALHILNRRRDRLTEI
EARYGMAVLFEADAKLSGPQIRIERLRAQTAPEPQSAPAALRMDFAPEAEPERAEAEREE
AAPESPEAARPAAAEATPNGASEEERNGEGRRRRRRRRRRGGRREDGTELNGAAESEAEG
DEGEEEEGDSAPAPALSEPVPAAPLLAEEEPEVVPDFGGEFSPRDGAEPRSRRRGRRGGR
RREGEAPRPESGQPPRPERRPEPRPAEPRAASRYAGPTPADPFAGTLDDIFDAMAAAEEA
AQQASLVKPVPLTQGPAPQPAAPAVPAASAPAEPVPAPLPEPAPVAETAPQPVAQPEVTQ
PEPAAQPEAVAEAPAAKPRRASRSRKAAVAEPAAEAAPAAAPEAVPEAAAEAPAKPRRAS
RSRKAAMAEPAAEVAPAPEAKPELAAEPAAEAPAKPRRAPRSRKPAAAPSAAELPAGQPA
PVVEAPVETSVEAAAAAPAAEPAAGEPVAAPPVQPVIVEASPDAPKKRGWWKR
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagcgcatgctgatcgatgcatcccacgccgaagagacacgcgtggtggtgctg
gacggcaaccggctcgaagaattcgacatcgagaccgagaacaagcgcccgctgaagggc
aatatctacctggccaaggtggttcgcgtcgaacccagcctgcaggccgccttcgtcgaa
tatggcggcaaccgccacggcttcctggccttcggcgagatccatcccgactactaccag
atccccgtcgccgaccgtgagcggctgctcgccctgcaggccgaggaggcgcaggacgag
gaggaggacgaggtctcggaggccgaggccgacgagatggtcgccgccatcgagcgcatg
gccgatgccgacgaggcgggcgagggccagccggagcagggcgagccgcgcagccaggcg
atggccagcggcgagagccgcagcgccagcccggaggagttgctggccgccgaggccgcc
gccgccgaggccaccgtgccgcatgagggtgtcgcgatcggcgagcccgccgacggcccc
gcccccgagctgcccgccgaggccgccgaggacccggagaacccgcccgagacgctgggc
ggccgcggcaaggaagagtccgacgacaatggccgcgaggagcgccgcatcccgccgcgc
ttcctgcgccactacaagatccaggaagtgatccgccgccggcagatcatgctggtgcag
gtcgtcaaggaggagcgcggcaacaagggcgcggcgctgaccacctatatcagcctggcc
ggccgcttctccgtgctgatgccgaactcgcccaagggcggcggcatctcgcgcaagatc
acctcgatcgccgaccgcaagcggctgcgcgaggcgatcgacgagctgaacatgccgcgc
ggcatgagcatgatcgtgcgcaccgccggcgccggcctgccgaagcccgagatccggcgc
gactgcgaatacctgctgcggctgtgggatgacatccgcgagcgcacgctgcaatcgacc
gcccccgccctgatctatgaggaggcggacctcatcaagcgctcgatccgcgacgtgttc
ggccgcgacatcgaggagatccaggtggagggcgagggcgcctaccgccaggcgcgcgac
ttcatgcgcatgctgatgccgcagaacgagcgcaagatccgcctctaccgcgacgcgacc
ctgccgctcttcgcccgccacggggtggacgcgcagctcgacgcgatgatgtcgcccacc
gtgcagctgaaatcgggcggctacatcgtcatcaaccagaccgaggcgctggtcgccatc
gacgtgaactcgggccgcgccacgcgcgaccggcacatcgaggacacggcgctgcgcacc
aacatggaggcggccgaggagatcgcccgccagctgcggctgcgcgacctggccggcctc
atcgtcatcgacttcatcgacatggagtcgccgcgcaacgacgcccaggtggagcgccgg
ctgaaggaggcgctgaagcacgaccgcgcccgcatccaggtcggccgcatcagccatttc
ggcctgctggagatgagccgccagcggctgcgccccagcctgaccgagcattccttcatc
acctgcccgcattgccagggcctcggcatcgtgcgcagcccggagagcgccgcgctgcag
gtgctgcgccagatcgaggaggagggcgccaagcgccgcgccgccgagatccaggtgtcg
atcgcgccggacctcgcgctgcacatcctcaaccgccgccgtgaccgcctgaccgagatc
gaggcgcgctacggcatggcggtgctgttcgaggcggatgcgaagctgtccggcccgcag
atccgcatcgagcggctgcgcgcccagaccgcgccggagccgcagagcgcgccggccgcg
ctgcgcatggatttcgcccccgaggcggagcccgagcgcgccgaggcggagcgggaagag
gccgcgccggaatcgccggaggccgcccgcccggcggccgccgaggccacgccgaacggc
gcctcggaggaggagcgcaatggcgaaggccgccgccgccgccgccgccgccgccgccgt
ggtggccgccgcgaggacgggacggagctgaacggcgccgccgagtccgaggcggagggt
gacgagggcgaggaggaggagggcgattccgccccggctcccgccctgtccgagccggtg
cccgccgcaccgctgctggccgaggaagagcccgaggtggtgcccgatttcggcggcgag
ttctcgccgcgcgacggcgccgagccgcgctcgcgccgccggggccgtcgcggcggccgc
cgccgcgagggcgaggcgccgcgtcccgagtccggccagccgccgcgcccggagcgccgc
cccgagccgcgcccggcggagccgcgcgccgcgtcgcgctatgccggcccgaccccggcc
gatcccttcgccggcacgctggacgacatcttcgacgccatggcggcggccgaggaagcg
gcccagcaggccagcctggtgaagccggtgccgctgacccagggccccgcgccgcagccc
gccgccccggcggtgccggccgcgtcggccccggccgagccggtgcccgccccgctgccg
gagcccgcccccgtggcggagacggcgccgcagccggtggcgcagcccgaggtgacgcag
ccggagccggcggcgcagcccgaggcggtggccgaggccccggccgccaagccgcgccgc
gccagccgcagccgcaaggcggcggtggccgagccggccgccgaggccgcgccggccgcc
gctcccgaggcggtgcccgaggcggccgcggaggccccggccaagccgcgccgcgccagc
cgcagccgcaaggccgcgatggccgagccggccgccgaggtggcgcccgcgcccgaggcc
aagccggagctcgcggccgagccggcggccgaggccccggccaagccgcgccgcgcgccg
cgcagccgcaagccggcggccgcccccagcgccgccgaactgccggccgggcagcccgcc
cccgtggtggaggcccccgtggagacctcggtggaggccgccgccgcggcgcccgcggcc
gagcccgccgccggggagccggtggccgcgccgccggtgcagccggtgatcgtcgaagcc
tcgccggacgcgccgaagaagcgcggctggtggaagcgctga
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