Teichococcus cervicalis: PFY06_07295
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Entry
PFY06_07295 CDS
T08750
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
rcv
Teichococcus cervicalis
Pathway
rcv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rcv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PFY06_07295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcv03019
]
PFY06_07295
Enzymes [BR:
rcv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PFY06_07295
Messenger RNA biogenesis [BR:
rcv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PFY06_07295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Utp25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WBV44356
LinkDB
All DBs
Position
1513151..1514518
Genome browser
AA seq
455 aa
AA seq
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MTDFAALGLAEPLLRALTQEGYTTPTPIQAQAIPHVLAGRDLLGIAQTGTGKTAAFALPV
LHHLADRKAPAPRGGCRALILSPTRELASQIHDNIRAYGRFLGLSSAVIFGGVGARPQVE
ALRRGVDVLVATPGRLQDHVQTGAAKLQGVEVLVLDEADQMLDRGFWPAVKRLSSVMSKN
RQTLFFSATMPAEIAKIAAEMLKDPAKVSVTPVATTAERIEQKLIHIDASQKRVLLSEML
RQPGIGRALVFARTKHGADRVTKHLNADGIAAHAIHGDRSQGQRERALAEFRTGRAPILV
ATDIASRGIDVDGVTHVFQFDLPDTPEAYVHRIGRTARAGASGEAIAFCAPDEVAKLKAV
EKLIAMKIPAEDRRSDAGRAEAAAAAPKPQPPRGRGRPQGQGQGRPAQAGAGRGDAGRGP
GSGAPRGRGAPGRAGHPAARKDRNWRDGDFRDSSR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacttcgctgccctcggcctggccgagcccctgctccgcgctctgacgcaggag
ggctacaccacccccaccccgatccaggcccaggcgatcccgcatgtgctggccggccgc
gacctgctgggcatcgcccagaccggcaccggcaagaccgccgccttcgccctgccggtg
ctgcaccatctggccgaccgcaaggcgccggcgccgcgcggcggctgccgcgccctgatc
ctgtcgccgacgcgcgagctggcctcgcagatccatgacaacattcgcgcctatgggcgt
ttcctcggcctgagctcggccgtcatcttcggcggcgtcggcgcccgcccgcaggtcgag
gcgctgcgccgcggcgtcgacgtgctggtggcgaccccgggccgcctgcaggaccatgtg
cagaccggcgccgccaagctgcagggcgtcgaggtgctggtgctggacgaggccgaccag
atgctggatcgcggcttctggccggcggtgaagcgcctctcctcggtgatgagcaagaac
cgccagacgctgttcttctccgccaccatgccggccgagatcgccaagatcgccgccgag
atgctgaaggacccggccaaggtctcggtcaccccggtggcgaccaccgccgagcggatc
gagcagaagctgatccatatcgacgccagccagaagcgcgtgctgctgtccgagatgctg
cgccagccgggcatcggccgcgccctggtcttcgcccgcaccaagcacggcgccgaccgc
gtgaccaagcacctgaacgccgacggcatcgcggcccacgccatccatggcgaccgcagc
cagggccagcgtgagcgggcgctcgccgagttccgcaccggccgcgcgccgatcctggtg
gcgaccgacatcgccagccgcggcatcgatgtcgatggcgtgacgcatgtcttccagttc
gacctgccggacacgccggaggcctatgtccaccgcatcggccgcaccgcgcgcgccggc
gcctcgggcgaggcgatcgccttctgcgccccggatgaggtggcgaagctgaaggctgtg
gagaagctgatcgccatgaagatcccggccgaggatcgccgcagcgatgccggccgcgcc
gaggccgccgccgccgcgcccaagccgcagccgccgcgtggccgtggccgcccccagggg
cagggccagggccgtccggcgcaggccggcgccggccgtggtgatgccggtcgtggtccg
ggcagcggcgcgccgcgcggccgtggcgcgccgggccgtgccgggcatccggcggcgcgt
aaggaccgcaactggcgcgacggcgatttccgcgacagctcgcgctga
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