Teichococcus cervicalis: PFY06_10340
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Entry
PFY06_10340 CDS
T08750
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rcv
Teichococcus cervicalis
Brite
KEGG Orthology (KO) [BR:
rcv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rcv03032
]
PFY06_10340 (topA)
03400 DNA repair and recombination proteins [BR:
rcv03400
]
PFY06_10340 (topA)
Enzymes [BR:
rcv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PFY06_10340 (topA)
DNA replication proteins [BR:
rcv03032
]
Prokaryotic type
DNA Topoisomerases
PFY06_10340 (topA)
DNA repair and recombination proteins [BR:
rcv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PFY06_10340 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
WBV41639
LinkDB
All DBs
Position
2182663..2185422
Genome browser
AA seq
919 aa
AA seq
DB search
MTDVVVVESPAKAKTINKYLGQDFTVLASFGHVRDLPPKDGSVRPEEDFAMDWSSEDRGE
KQVAAIAKALRGARNLYLATDPDREGEAISWHVQEMLRQKGVLKGVQVHRITFNEITKRA
VQHALAHPRDLDTPLIEAYLARRALDYLVGFTLSPVLWRKLPGSRSAGRVQSVALRLICE
REAEIEVFKAREYWTVEGRFLTADAAPFSARLTHLDGKKLDQFDLPDEASAMRAKSAVEA
GRFSIASVEKKRSRRNPPPPFTTSTLQQESSRKLGFGAQQTMRLAQQLYEGVEMQGETVG
LITYMRTDGVQMAREAMFAIRDHVKESFGPDYIPAAPREYSSKAKNAQEAHEAIRPTDVT
RTPEQVARFLNPEQRRLYELVWKRAVASQMQSAELDQTVVDLADEAGRTRLRANGSVIAF
DGFLKLYREDLDDAPAGASAGEEEDTRTLPPMREKDPAKLSAAQADQHFTQPPPRYSEAS
LVKKMEELGIGRPSTYASILQTLQDRDYVKLDKRRFVPEDRGRLVTAFLVNFFERYVNTG
FTATLEEQLDDISGGRAEWREVMRQFWRDFNAAIAATKDLTISEVIDALDEELGPHFFPT
PADGGDPRACPACGNGRLGLRLGRNGAFIGCSNYPECRHTRPLSVSGAEAEQEGALAGGI
KELGPDPVTGAPVTLRRGPYGLYVQLGEAGTDAKGKPTKPKRASLARGMDPDSLDLDRAL
ALLALPRIVGLHPETGEEISAAIGRFGPYVKMGSIYKSLDKDDDVLTVGINRAVALLADA
KAKVRSMGPHPKDGEPVEIKRGRFGPYAQHAGMVASLPRNLTMEEISLEQAVQLLAEKGK
KLPPLGAKKGAAKGKARTAKAAAPAAEGTETAKPARKAPAKAAAAKAAPKAAAAKSGTAK
PKTAAKAPAKARAPAKAKA
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgttgtcgtcgtcgaatcgccggccaaggcgaagaccatcaacaagtatctc
gggcaggatttcaccgtgctggccagcttcggccatgtgcgcgacctgccgcccaaggat
ggcagcgtccgtcccgaggaagacttcgcgatggattggagctccgaggaccggggcgag
aagcaggtggccgccatcgccaaggcgctgcgcggcgctcgcaacctctacctcgccacc
gacccggatcgcgagggcgaggcaatctcctggcatgtccaggagatgctgcgccagaag
ggggtgctgaagggggtgcaggtccatcgcatcaccttcaacgagatcaccaagcgcgcc
gtgcagcacgcgctggcgcatccgcgcgacctggatacgccgctgatcgaggcctatctg
gcccgccgcgcgctggactacctggtgggcttcaccctctcccccgtgctgtggcgcaag
ctgccgggcagccgctcggcgggccgcgtgcaatcggtcgcactgcggctgatctgcgag
cgcgaggcggagatcgaggtcttcaaggcgcgcgaatactggacggtggagggccgtttc
ctcaccgccgacgccgcccccttctccgcccggctgacgcatctggacggcaagaagctc
gaccagttcgacctgccggacgaggccagcgcgatgcgcgccaagtccgcggtcgaggcc
gggcggttcagcatcgccagcgtcgagaagaagcgcagccggcgcaacccgccgccgccc
ttcaccacctcgaccctgcagcaggagagctcgcgcaagctcggcttcggcgcgcagcag
accatgcgcctggcccagcagctctacgaaggcgtggagatgcagggcgagacggtcggc
ctgatcacctatatgcggaccgacggtgtgcagatggcgcgggaggcgatgttcgccatc
cgcgaccatgtgaaggagagcttcggccccgactacatcccggccgcgccgcgcgaatac
tcctccaaggcgaagaacgcgcaggaggcgcatgaggcgatccgcccgaccgacgtgacc
cgcacgccggagcaggtggcccgcttcctgaaccccgagcagcgccggctctacgagctg
gtctggaagcgcgccgtcgccagccagatgcaatcggccgagctggaccagaccgtggtc
gacctggccgatgaggccggccgcacccggctgcgcgccaatggcagcgtcatcgccttt
gacggcttcctgaagctctaccgcgaggatctggacgacgccccggccggcgccagcgcc
ggcgaagaggaggacacccgcaccctgccgccgatgcgggagaaggacccggcgaagctg
tccgccgcccaggccgaccagcacttcacccagccgccgccgcgctattccgaggccagc
ctggtgaagaagatggaggagctcggcatcggccgcccctccacctacgcctcgatcctg
cagacactgcaggaccgcgactatgtgaagctggacaagcggcgcttcgtgcccgaggac
cgcggccggctggtcaccgccttcctggtcaatttcttcgagcgctacgtcaacaccggc
ttcaccgcgacgctggaggagcagctcgacgacatctccggcggccgcgccgagtggcgg
gaggtgatgcggcaattctggcgcgacttcaacgccgccatcgccgccaccaaggacctc
accatcagcgaggtcatcgacgcgctggacgaggagttggggccgcatttcttccccacc
ccggccgatggcggcgacccgcgcgcctgcccggcctgcggcaacgggcggctcggcctg
cggctcgggcgcaacggcgccttcatcggctgctccaactacccggaatgccgccacacc
cgcccgctctccgtctcgggcgccgaggccgagcaggagggggcgctggccggcggcatc
aaggagctgggccccgacccggtgaccggtgcgccggtgacgctgcgccgcggcccctat
ggcctgtatgtccagcttggcgaggccgggacggacgccaagggcaagccgaccaagcca
aagcgcgccagcctggcgcgtggcatggacccggattcgctcgatctcgaccgggcgctg
gcgctgctcgccctgccacgcatcgtcggcctgcatccggagacgggggaggagatctcc
gccgccatcggccgcttcggcccctatgtgaagatgggcagcatctacaagtcgctcgac
aaggatgacgacgtgctgaccgtcggcatcaaccgcgccgtggcgctgctggcggatgcc
aaggcgaaggtgcgcagcatggggccgcatccgaaggatggcgagccggtggagatcaag
cgcggccgcttcggcccctatgcccagcatgccggcatggtcgccagcctgccgcgcaac
ctgaccatggaggaaatctccctggaacaggcggtgcagttgctggccgagaagggcaag
aagctgccgccgctgggcgccaagaagggcgctgccaagggcaaggcgcggaccgccaag
gccgcggcgccggcggccgagggaaccgagacggccaagccggcccgcaaggcaccggcc
aaggcagctgccgccaaggccgcgccgaaggccgctgcggccaagagcggcacggcgaag
ccgaagacggccgcaaaagccccggccaaggccagggcgccggccaaggcgaaggcgtaa
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