Roseobacter denitrificans: RD1_0003
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Entry
RD1_0003 CDS
T00376
Name
(GenBank) aminomethyltransferase, putative
KO
K00605
glycine cleavage system T protein (aminomethyltransferase) [EC:
2.1.2.10
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00260
Glycine, serine and threonine metabolism
rde00630
Glyoxylate and dicarboxylate metabolism
rde00670
One carbon pool by folate
rde00785
Lipoic acid metabolism
rde01100
Metabolic pathways
rde01110
Biosynthesis of secondary metabolites
rde01200
Carbon metabolism
Module
rde_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RD1_0003
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RD1_0003
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RD1_0003
00670 One carbon pool by folate
RD1_0003
Enzymes [BR:
rde01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.10 aminomethyltransferase
RD1_0003
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GFIT
Motif
Pfam:
GCV_T
GCV_T_C
TrmE_N
Motif
Other DBs
NCBI-ProteinID:
ABG29743
RoseoBase:
RD1_0003
UniProt:
Q16E50
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All DBs
Position
1723..2871
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AA seq
382 aa
AA seq
DB search
MAIIYRTSALAQRHAEIGGELEDWNGMGTAWFYDHSDERAKADYEAVRTKAGLMDVSGLK
KIHLSGPHAAAVIDRATTRNVDKLMPGRAVYAAMLDDRGLFIDDCVIYRLSVNNWLLVHG
TGTGHESLAMAAYGKNVSMIFDDDLHDMSLQGPVAVDFLAKHVPGIRDLAYFGIIQTKLF
GMPVMISRTGYTGERGYEIFCEGRHAIALWDAILEDGKDMGIRPVQFSTLDLLRTESYLL
FYPGDNSETYPFENGAACGDSLWELGLEFTVSPGKTGFRGAENHYALEGKERFKIYGVRL
EGTTAADEGADLLKDGEKVGVVTYGMRSDLFDHTVGIARMPVECATPGTKMTVRNGDGTE
IPCVAEEMPFYDKDKAIRTAKG
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcatttacagaacgtcggcactggcgcagcgccatgctgaaatcggcggtgaa
ctggaagactggaatggcatgggaaccgcatggttctacgaccattccgatgagcgtgcg
aaagcggactacgaggctgtgcgcaccaaggccggccttatggatgtgtcgggcctcaag
aagattcacctgagcggtccgcacgcagcagcggtaatcgaccgggccaccacgcgcaac
gtggacaagctgatgccgggtcgcgcggtctatgccgcgatgctggacgatcgcggtctc
tttatcgacgactgcgtgatctaccgtttgtcggtgaacaactggcttttggtccacggc
acgggaacaggccacgaaagccttgcgatggccgcctatggcaagaatgtgtcgatgatc
tttgacgacgatctacacgatatgtcgctgcagggtcccgttgcggtggatttcctcgcc
aaacatgtgccgggcattcgtgatctcgcgtatttcggcatcatccagaccaaactgttc
ggcatgcccgtcatgatttcgcgcaccggctataccggcgagcgcggctacgagattttc
tgcgaaggccgtcacgccatcgccctgtgggacgcgatcctcgaagatggcaaggacatg
ggcattcgcccggtgcagttctccaccctcgacctgctgcggaccgaaagctacctgctg
ttctatcccggcgacaattccgagacctaccccttcgagaatggcgccgcctgtggcgac
tcgctgtgggagctggggctggaattcaccgtctcaccgggcaagaccggtttccgcggt
gcggaaaaccactatgcgcttgagggcaaggaacgcttcaagatctacggcgtgcggctt
gaaggtacaaccgccgcggatgagggggcagatttgctcaaggatggcgaaaaggtcggt
gtcgtgacgtatggcatgcgctctgatctgtttgatcacaccgtaggcattgcccggatg
cccgtcgaatgtgcaaccccgggaaccaagatgacggtgcgcaatggcgatggcacggaa
atcccatgtgtcgccgaggaaatgccattctatgacaaggacaaggccatccgcacagcc
aagggctga
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