Roseobacter denitrificans: RD1_0015
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Entry
RD1_0015 CDS
T00376
Symbol
opuAB
Name
(GenBank) glycine betaine transporter, permease protein
KO
K02001
glycine betaine/proline transport system permease protein
Organism
rde
Roseobacter denitrificans
Pathway
rde02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RD1_0015 (opuAB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_0015 (opuAB)
Transporters [BR:
rde02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
RD1_0015 (opuAB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
ABG29755
RoseoBase:
RD1_0015
UniProt:
Q16E38
LinkDB
All DBs
Position
14913..16892
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AA seq
659 aa
AA seq
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MAIVATNTESQTTPLSSRTLGLGLFLFAVALTLLHYAGLLPAWLHRLPEAVIPPFETWLD
AIFNFVKDDLGLLALTRFLTGGLEAVLDVTANLLYGKRRWPFIDPIPWSAIAAATTVLGY
YLGGWRLAALAGGTCVWTAMIGQWEIAMETMSVLVISAPLAFMIGLLVGIYAWKSPSFNR
ALLPFLSVMQTLPFFTYLLPAVIFFKVGPTAAAVATTVFAIPPMILMTTLGLQKVSSEVV
EAGKMSGCTRFQMMRHVYLPSARTEILVGVNQVIMLCLAMVVLTAFIGMPGLGAKLLQML
GSFKIGRAFEIGVTIVLVAITLDRLSKAWVAKLPEHFDRGTPFYIRHKYLVAGAVGFALF
FALAQLVPILAEVGRRQSLSQGREIDQLIKAYLALDWVKASTDAMRYVLNVWILNPFRDF
LLSIPTSAFIILVVAAGLVIAGPRQAVLAAVFFSLVALSGWWDRSVITLYSVIAAVSLAL
IIGIPVGILAARRETTARRMLLVCDTAQTFPSFIYLIPAIMLFGITATSVVMSILIFAMV
PLVRYTIEGLRSVPAEMMEAADMSGATKLQKLWQVQLPLALPTMAVGFNQAIMFAFFMVI
IAAFIGTQDLGQELQRTLAGAYLGKNLVLGLCVSLMALTFDMIVMKWAQEKKAKLGLAR
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggcgattgttgcaacaaacaccgaaagccagacaacgccactgtcatcgcgcactttg
gggttggggctctttcttttcgccgtcgcactgaccttgctgcactacgcgggtctcttg
ccagcgtggctgcaccggctgcccgaagcggtgatcccgccctttgagacatggcttgat
gcgattttcaactttgtcaaagacgaccttggcctgctcgccctgacgcggtttctgacc
ggagggcttgaagcggtgctcgatgtgaccgcgaacctgctttatggcaaacgtcgctgg
cccttcatcgaccccattccatggagcgcgatcgcagcggcaacgaccgtgcttggctat
tatcttggtggctggcggctggcggctctggcggggggcacctgtgtctggaccgcgatg
atcggccagtgggaaatcgccatggaaaccatgtcggtgctggttatctcagcgcccctt
gcttttatgatcggtctgctggtcggtatctatgcgtggaaatccccgtcgttcaatcgc
gcgctgctgccgttcctgtcggtcatgcagactctgccgtttttcacctacctgcttccg
gcggtgatcttcttcaaggtcggcccgacggcggcggcggtggccacgacggttttcgcc
atccccccgatgatcctgatgacgacgctcggcctgcaaaaggtatcctccgaagttgtc
gaggcgggcaagatgagtggttgcacgcgctttcagatgatgcggcatgtctaccttccg
tcggcccgcaccgagatcctcgtcggcgtgaaccaggtcatcatgctctgtctggcaatg
gtcgttctgacagcctttatcgggatgccgggacttggcgcaaaactcttgcagatgctc
ggcagcttcaagatcggccgcgcattcgagatcggcgtcaccatcgtgctggtcgcgatc
acacttgatcgcctgtccaaagcatgggttgcgaaactgcccgaacactttgatcgtggc
acacctttctacatccggcacaaatatctggttgccggtgccgtgggctttgcgctgttc
ttcgcactcgcgcagctggttcccatccttgcagaagtcgggcggcggcaatcgctgtca
cagggccgcgagattgaccagttgatcaaagcctaccttgcgctggattgggtgaaagca
tcgaccgacgccatgcgctacgtgctgaacgtctggatcctcaacccgttccgcgacttc
ctgctcagcatcccgacaagtgcgttcatcattctggtggttgccgccgggctggtgatc
gccgggccgcgtcaggcggttctggcggcagtcttcttcagccttgtcgcgctcagcggc
tggtgggacagatcagtgatcacgctctattccgtgattgctgctgtatcgctggcgctg
atcatcggcattccggtgggcatccttgcggcacggcgcgaaaccaccgcccggcggatg
ttgctggtctgtgatacagcgcagaccttccccagcttcatctacctgatcccggcgatc
atgctgttcggcatcacggccacctcggttgtcatgtcgatcctgatcttcgccatggtg
ccactggtgcgctataccatcgaaggtttgcgcagcgtacccgccgaaatgatggaagcc
gccgacatgtcgggcgcaaccaagctgcaaaagctgtggcaggtgcaactgccgctggcg
ctgccgacgatggccgtgggctttaatcaggcgatcatgttcgcattcttcatggtcatc
atcgcggccttcatcggcacgcaggatctgggccaggaactgcaacgcacgctggccggg
gcctatctgggcaagaacctcgttctgggcctttgcgtttcgctgatggcgctgaccttc
gacatgattgtcatgaagtgggcacaggagaagaaagcgaaactggggctggcgcgttaa
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