Roseobacter denitrificans: RD1_0025
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Entry
RD1_0025 CDS
T00376
Name
(GenBank) thiolase, N-terminal domain
KO
K00626
acetyl-CoA C-acetyltransferase [EC:
2.3.1.9
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00071
Fatty acid degradation
rde00280
Valine, leucine and isoleucine degradation
rde00310
Lysine degradation
rde00362
Benzoate degradation
rde00380
Tryptophan metabolism
rde00620
Pyruvate metabolism
rde00630
Glyoxylate and dicarboxylate metabolism
rde00650
Butanoate metabolism
rde00720
Other carbon fixation pathways
rde00900
Terpenoid backbone biosynthesis
rde01100
Metabolic pathways
rde01110
Biosynthesis of secondary metabolites
rde01120
Microbial metabolism in diverse environments
rde01200
Carbon metabolism
rde01212
Fatty acid metabolism
rde02020
Two-component system
Module
rde_M00373
Ethylmalonyl pathway
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
RD1_0025
00630 Glyoxylate and dicarboxylate metabolism
RD1_0025
00650 Butanoate metabolism
RD1_0025
09102 Energy metabolism
00720 Other carbon fixation pathways
RD1_0025
09103 Lipid metabolism
00071 Fatty acid degradation
RD1_0025
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RD1_0025
00310 Lysine degradation
RD1_0025
00380 Tryptophan metabolism
RD1_0025
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
RD1_0025
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RD1_0025
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RD1_0025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rde04147
]
RD1_0025
Enzymes [BR:
rde01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.9 acetyl-CoA C-acetyltransferase
RD1_0025
Exosome [BR:
rde04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
RD1_0025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Thiolase_N
Thiolase_C
Thiolase_C_1
ketoacyl-synt
Motif
Other DBs
NCBI-ProteinID:
ABG29765
RoseoBase:
RD1_0025
UniProt:
Q16E28
LinkDB
All DBs
Position
complement(25435..26607)
Genome browser
AA seq
390 aa
AA seq
DB search
MTDVLILGAARTPMGGFQGALSSFSAAQLGGVALKSALQDAGVSSVDEVLMGCVLPAGQG
QAPARQAGFAAGLDETVPATTLNKMCGSGMKAAMIAFDQIALGQAGLVAAGGMESMSNAP
YLLHKMRSGARLGHSEVIDHMFLDGLEDAYDKGRLMGTFAEDCAEMFQFSRQAQDAYALA
SLSRAVEAQKSGAFDGEITPVDVVSRKGTIKVSADEQPGAARPDKIPQLKPAFREGGTVT
AANASSISDGAAALVLASGAYAASKNLTARARIVGHATHAQTPGLFTTAPVPAARKLLEK
TGWDKGSVDLWEVNEAFAVVPLAFMHEMALDHEVVNVNGGACALGHPIGASGARIMVTLL
NAMEKRDVKRGVAAICIGGGEATAIAIERG
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgacagatgttttgatcttgggcgcggcgcgcacaccaatgggtgggtttcagggcgcg
ctgtcctctttcagcgcggcacagcttggcggtgtggccttgaaatcggcgctgcaggat
gctggcgtttcatcggttgatgaagttctgatgggctgcgtattgccggcggggcagggg
caggcaccggcccggcaagcgggttttgccgctggtctggatgaaaccgtaccggccacc
acgctgaacaagatgtgtgggtccggcatgaaagcggccatgattgcctttgatcaaatc
gcgttggggcaggccggtctggtcgcggcgggcgggatggagagcatgagcaacgccccc
tatctgctgcataaaatgcgctctggcgcgcgtttggggcacagtgaagtgattgatcac
atgtttctggatgggttggaagacgcctatgacaaggggcggctgatgggcacttttgcc
gaagactgtgccgagatgtttcagttcagccggcaggcgcaggatgcatatgcactggca
tccttgtcccgcgcggtggaggcgcagaagtccggcgcctttgacggcgaaataacgccg
gttgacgtggtgtcgcgcaagggcacgatcaaggtcagcgcggatgaacagccgggggca
gcaaggccggataaaatcccgcagctcaagcccgcgtttcgcgaaggcggcacggttact
gcggcgaatgcctcgtccatttcggatggcgcggcggcgctggtcttggcctcaggtgct
tatgccgcatcaaaaaacctgaccgcgcgtgcgcgcattgttggccatgcaacccacgca
cagacaccgggtttgtttacgactgccccggttccggccgcccggaaacttttggaaaag
acaggctgggacaagggcagcgttgatctgtgggaggtgaacgaagccttcgcggttgtg
ccgctcgccttcatgcatgaaatggctcttgatcacgaagtcgtaaacgtgaacggcggt
gcctgtgcgctggggcatccgattggcgcatcgggcgcgcggatcatggtgaccttgctg
aatgcgatggaaaagcgcgatgtcaaacggggtgtcgctgcgatctgtattggggggggc
gaggcgactgccattgcgattgaacgcggctaa
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