Roseobacter denitrificans: RD1_0057
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Entry
RD1_0057 CDS
T00376
Name
(GenBank) 4Fe-4S binding domain protein, putative
KO
K18979
epoxyqueuosine reductase [EC:
1.17.99.6
]
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rde03016
]
RD1_0057
Enzymes [BR:
rde01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.99 With unknown physiological acceptors
1.17.99.6 epoxyqueuosine reductase
RD1_0057
Transfer RNA biogenesis [BR:
rde03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
RD1_0057
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
QueG_DUF1730
Fer4_16
Fer4_10
Fer4_7
Fer4_9
Fer4_3
Fer4
Fer4_8
Fer4_21
Fer4_6
Fer4_2
Fer4_17
DUF6233
Motif
Other DBs
NCBI-ProteinID:
ABG29794
RoseoBase:
RD1_0057
UniProt:
Q16DZ9
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All DBs
Position
complement(56013..57056)
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AA seq
347 aa
AA seq
DB search
MSGLKEKLVARALEEGFIACRICRPDAVPDVAARLKAFVDAGHHGQMTWMADRIHWRGDP
TQLWPQARSVIMLAESYGPEHDPMAVLQQPERGAISVYAQGRDYHDVVKKRLKRLARWLM
AEAADADLQVKVFVDTAPVPEKALGQAAGLGWQGKHTNLLSREWGNWAFLGAVFTTLDIA
PDAPEVDHCGSCRACLDVCPTDAFPAPYQLDARRCISYLTIEHKGPVPTDLRPLLGNRIY
GCDDCLAVCPWNKFATTARDMRLSARPELTAPRLADLAALDDAAFRALFSGSAVKRIGRN
RFVRNVLYAIGNSGEASLRQTASELMDDPDDAVADAARWAVAQLGRK
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcctcaaggaaaagctcgtcgcgcgcgctttggaagaggggttcatcgcctgc
aggatatgccgaccggatgcggtgcccgatgtggccgcgcggctcaaagcgtttgtggat
gcgggccatcacggtcagatgacgtggatggcggatcggatacattggcgcggggacccg
acgcagctttggccgcaggcgcgctctgtgatcatgctggccgagagctatggccctgaa
cacgacccgatggcggtgctgcagcagcccgagcgcggggccatttcggtctacgcgcag
gggcgcgattatcacgatgtggtcaagaaacggctcaaacggctggcgcgctggctgatg
gctgaggccgccgatgctgacctgcaggtcaaggtctttgtcgatacggccccggtgccg
gaaaaggcgctgggtcaggcggcgggtctgggctggcagggcaaacacacgaacctgctc
agccgggagtggggcaattgggcatttctgggcgcggtgtttaccacgctggatattgcg
ccggacgcgccggaggttgatcattgcggatcgtgtcgcgcctgtcttgatgtctgcccg
acggatgcttttcccgcgccctaccagttggatgcgcgccgctgcatttcctatctgacg
attgagcacaaaggacccgttccgaccgatttgcgcccgctgttgggcaaccggatttat
ggctgtgatgattgtctggcggtctgtccgtggaacaaatttgccaccactgcgcgcgac
atgcggctgtcggcgcggcccgaactgacggcaccccgattggccgacctcgccgcactt
gatgatgcggcgtttcgtgcgctgttttcggggtctgcggtcaagcgcatcgggcgcaac
cgtttcgtgcgcaatgtgctttatgcgattggtaattcgggtgaggcgtctttgcgccag
accgcgtctgagttgatggatgatccggatgatgccgtggcggatgcggcgcgctgggcg
gtggcgcaactgggtaggaagtga
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