Roseobacter denitrificans: RD1_0115
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Entry
RD1_0115 CDS
T00376
Symbol
crtD
Name
(GenBank) methoxyneurosporene dehydrogenase
KO
K09845
1-hydroxycarotenoid 3,4-desaturase [EC:
1.3.99.27
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00906
Carotenoid biosynthesis
rde01100
Metabolic pathways
rde01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
RD1_0115 (crtD)
Enzymes [BR:
rde01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.99 With unknown physiological acceptors
1.3.99.27 1-hydroxycarotenoid 3,4-desaturase
RD1_0115 (crtD)
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Motif
Pfam:
Amino_oxidase
DAO
NAD_binding_8
HI0933_like
FAD_binding_2
Pyr_redox_2
Pyr_redox
FAD_oxidored
GIDA
FAD_binding_3
Thi4
Pyr_redox_3
MCRA
AlaDh_PNT_C
NAD_binding_9
Lycopene_cycl
ApbA
Glu_dehyd_C
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
ABG29850
RoseoBase:
RD1_0115
UniProt:
Q16DU3
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Position
114612..116162
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AA seq
516 aa
AA seq
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MHVSTAPLIPDRPRAIVIGAGIAGLAAALRLATSGMQVTLLERHNHPGGKIRTLSSAAGP
VDAGPTVLTMRHVFDDLFACAGTRLKDHVTLVPQSILARHFWPDGSKLDLHADPLLSRDA
IAAFAGNTSADEFMQFNRRTQQLFDAFDAPMMQAPNPRMRDLVPHVLKQPQLIAAMAPLS
TLKTSLGRAFSDPRLAQLFGRYATYVGGAPHLSPAILSLIWQAEAAGVWVVEGGMHKLAH
AIAKLARHAGVDIRYNTHVDRIKTVGGRAVGVEIDGTYLLEAEAILYAGDPRALATGSMG
ADLRVVAPQTVKLPRSFSARVHSFAATPQGRDLTHHNVFFAADPDCEFKELMAGRMPADP
TLYLCAEDRGHGADIPTLERFEMISNAPATETHTPPQEIEKWHQQIMQRMADMGVTFTPM
PTTETLTTPQDFAMLFPETLGALYGQTPHGLTAALQRPTAQTPIAGLWLAGGGTHPGAGV
PMATLSARHAAEAILRAQTSTSLSAPTATPGGMSTG
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtttcaaccgcccccctcattcccgaccggccacgtgctattgtgattggtgca
ggcatcgcgggtcttgccgccgctttgcgtctggcgaccagcggcatgcaggtcaccttg
ctggaacggcacaatcatcccggcggcaagatcagaaccctgagcagcgccgccggaccc
gtcgatgccggccccaccgttttgacgatgcgtcatgtttttgacgatctgtttgcctgc
gcgggcacgcggctcaaggaccatgtgacgcttgtgccacaaagcatcctcgcgcggcat
ttctggcccgacggcagcaagctggacctgcacgcagacccgctcttgagccgcgatgcc
atcgccgcctttgcgggcaacacatccgccgatgagttcatgcaattcaaccgacgcacc
caacagctgttcgatgcctttgatgcgccgatgatgcaggcccccaacccaaggatgcgc
gaccttgtcccgcatgtgctcaagcaaccgcagttgattgccgccatggccccgctgtcg
acgttgaaaacatcgctgggccgcgccttcagcgacccgaggcttgcgcagctatttggc
cgctatgccacctatgtgggcggtgcgccccacctcagcccggcgatcctgtcgctgatc
tggcaggcagaggccgcaggcgtctgggtcgtcgaaggaggcatgcacaaactggcccac
gccatcgccaaactggcgcgacacgcaggtgtcgacatccgctacaacacccatgtggac
cgcatcaaaacagtgggcgggcgcgccgtgggcgtagaaatcgacggcacctatcttttg
gaagccgaggcgatcctttacgcgggcgatccgcgcgcgctcgccaccggcagcatgggt
gcagacctcagggtcgtggccccgcagaccgtcaaactgccccgatccttctccgcccgc
gtgcacagctttgccgcgaccccgcagggacgtgatctgacccatcacaacgtcttcttt
gctgcggacccggattgcgagttcaaagagctgatggcagggcgcatgcccgcggatccc
acgctatacctctgtgccgaagaccgaggtcacggcgccgacatccccacccttgagcgt
ttcgagatgatctcgaacgcgcccgcaacagagacacacactcccccacaggagattgaa
aaatggcaccagcagatcatgcaacggatggcggatatgggcgtgactttcacgccgatg
ccgacaacagagacgctcacgacgccgcaggatttcgcgatgctctttcccgaaacgctc
ggcgcgctttacggccagacgccgcacgggctgacagcggcactccagcgcccgacagcg
cagacgccgattgcgggactatggctcgcggggggcggcacccatccgggggcgggggtc
ccgatggcgacactctccgcccggcacgcggcagaggcgatcttgcgcgcccaaacttca
acgtcgctgtcggccccaacggctacgcctggtggtatgtcgacgggctga
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