Roseobacter denitrificans: RD1_0173
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Entry
RD1_0173 CDS
T00376
Name
(GenBank) polyamine ABC transporter, ATP-binding protein, putative
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
rde
Roseobacter denitrificans
Pathway
rde02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RD1_0173
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_0173
Transporters [BR:
rde02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RD1_0173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
AAA_25
SMC_N
nSTAND_NTPase5
nSTAND3
AAA_22
DO-GTPase2
AAA_33
Myosin_N
Motif
Other DBs
NCBI-ProteinID:
ABG29905
RoseoBase:
RD1_0173
UniProt:
Q16DN8
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All DBs
Position
172145..173260
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AA seq
371 aa
AA seq
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MGSQTLAEKSSNDSFVEFDRVQKSYDGENLVVKDLNLFMPKGEFLTMLGPSGSGKTTCLM
MLAGFETATHGDIRLDGVSINNIPPHKRGIGMVFQNYALFPHMTVAENLSFPLEVRKMGK
SDREAKVKRALDMVQMGDFAGRRPAQLSGGQQQRIALARALVFEPELVLMDEPLGALDKQ
LRETLQFEITNLAHALGITVVYVTHDQTEALTMSDRVAVFDDGRIQQLAPPDKLYEEPEN
SFVAQFIGENNTLEGVVKEIKGDHCLIQLDDGGLIDAKPINVSAVGERTRVSIRPERVEY
NKDRLSPDAHTLHAEVLEFIYMGDIFRTRLRVAGIDEFVIKTRNAPDVDRLKPGQSIEIG
WLPEDCRALDA
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggggagccaaaccttggctgaaaaaagctcaaacgactcgttcgtcgaattcgaccgc
gtgcagaaaagctatgacggtgaaaatctggtcgtaaaagatctgaacctgttcatgccg
aaaggtgagtttctcacgatgctggggccatcgggttccggcaagacaacatgccttatg
atgctggccggctttgaaaccgcgacgcatggggatatccgccttgacggggtgtcgatc
aacaacattccgccgcacaagcgcgggatcgggatggtgttccagaattacgcgttgttc
ccgcatatgacggtggcggagaacctgtccttcccgctggaagtgcgcaagatgggcaaa
tcggaccgcgaggcgaaagtgaaacgcgcgctcgacatggtgcagatgggcgatttcgcc
gggcgccgtcccgcacaattgtccgggggtcagcagcagcggattgccctggcccgggcg
cttgtgttcgagccggaactggttttgatggacgaacccctgggtgcgctggacaaacag
ctgcgcgaaacgctgcagtttgagattaccaaccttgcccacgctctggggatcacggtc
gtctatgtcacgcacgaccagaccgaagccttgacgatgtcggaccgtgttgcggtgttt
gacgatgggcgcattcagcaactcgccccgccggacaagctctatgaagagcccgaaaac
agcttcgtggcgcagttcatcggcgagaacaacacgcttgaaggtgtggtcaaggaaatc
aagggcgatcattgcctgatacaactggacgatggtggtctgatcgatgccaagccgatc
aacgtatcggcggttggcgagcgaacccgcgtttccatccggcctgaacgggtcgaatac
aacaaggaccgcctgagccccgatgcgcatacgctgcatgccgaagtgctggagttcatc
tatatgggcgacattttccggacgcgcctgagggtagcgggcattgatgaattcgtgatc
aagacccgcaacgcaccggacgttgaccgcctgaaacccggccagtccatcgaaatcggt
tggctgccggaagattgccgcgccttggacgcctga
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