Roseobacter denitrificans: RD1_0181 Help Entry RD1_0181          CDS       T00376                                  Name (GenBank) transglycosylase, putative   KO K08305   peptidoglycan lytic transglycosylase B [EC:4.2.2.29] Organism rde  Roseobacter denitrificans Brite KEGG Orthology (KO) [BR:rde00001]  09180 Brite Hierarchies   09181 Protein families: metabolism    01011 Peptidoglycan biosynthesis and degradation proteins [BR:rde01011]     RD1_0181 Enzymes [BR:rde01000]  4. Lyases   4.2  Carbon-oxygen lyases    4.2.2  Acting on polysaccharides     4.2.2.29  peptidoglycan lytic transglycosylase      RD1_0181 Peptidoglycan biosynthesis and degradation proteins [BR:rde01011]  Peptidoglycan biosynthesis and degradation   Lytic transglycosylase    RD1_0181 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SLT_2 PG_binding_1 PG_binding_3 Glucosaminidase Motif Other DBs NCBI-ProteinID:  ABG29910 RoseoBase:  RD1_0181 UniProt:  Q16DN3 LinkDB All DBs Position complement(177764..179119) Genome browser AA seq 451 aa AA seqDB search MKRMIFWSGMLGLVLGVNGAYAQTSGQSLRPVVRPAVAPPVNLVDVAASGTAIERAIRPK LRTDAIKGEAEMALALATSAAEFDAWVAGFKDRAARQGIRSATLESAFQGVRFDSDVIRR DRNQSEFTKTIWQYLASAASDRRIANGKAALAKHRTTLEAIERRYGVEKEVVVAVWGLES GYGAYRGSNDVIRSLATLAYEGRRGAFFEEQLIAALKILQNGDTAPRNMTGSWAGAMGHT QFIPTSYLAYAVDFTGDGRRDIWSEDPTDALASTAAYLKNAGWKTGQPWGVEVQLPQGFD YAQANRITRKTPGAWARLGVRDMSGRKVANHGRAAILLPAGAEGAAFMIFDNFAAIERYN AADAYVIGVGHLSDRIKGGGPIRSSWPTDERALTFAERKEIQQRLTHAGFNTQGVDGRIG PKTTDAIRAFQRNRGLVADGYASSALLQKLR NT seq 1356 nt NT seq  +upstreamnt  +downstreamnt atgaaacgcatgatcttttggtcgggtatgcttggcttggtgttgggggtaaatggtgcc tatgcccagacctccgggcagtccttgcggcccgtggtgcgcccggccgttgcgccgccg gtgaaccttgtcgatgttgccgcgtcaggcacggcgattgagcgggcgattcgacccaaa ctgaggacggatgccatcaagggcgaggccgaaatggcacttgcgctggccacttccgcc gccgagtttgacgcctgggtggcggggttcaaggaccgtgcggcgcgacaggggatcaga tcggcaacgttggaatctgcctttcaaggtgtgcgttttgacagcgatgtgatccggcgg gacagaaaccagtccgaattcaccaagacgatctggcagtatcttgcgagtgcggcctcg gatcggcgcatcgcgaatggcaaggcggcactggccaaacaccgcacaacgctggaggcg atcgagcggcgctacggcgttgaaaaggaagtcgtcgtcgcggtctgggggctggaaagc ggctatggtgcctatcgcggctcaaatgatgtgatccgctctctggcgactctggcctat gaaggacggcgcggcgcgtttttcgaagaacaattgatcgcggcactgaaaatcctgcaa aacggagacacggccccgcgcaatatgaccggcagctgggccggggccatgggacatacg cagtttattcccacgtcttaccttgcctatgccgttgatttcacgggcgatgggcggcgc gacatctggtcggaggatcctactgacgcgctggcctctacggcggcctatctgaaaaac gcaggttggaaaaccggccagccctggggcgttgaggtacaactgccgcaagggtttgac tatgcgcaggccaaccggatcaccagaaagacacccggtgcttgggcgcgcttgggtgtc agagacatgagtggtcgcaaagtggccaatcacgggcgtgcggccatcctgctgcccgct ggcgcagagggtgcggccttcatgatcttcgataattttgccgccatcgaacggtataac gcggcggatgcctatgtcatcggagtgggccatctgagcgaccgtatcaaaggcggcggc ccgatccggtcaagctggcccacggacgaacgggcgctgacctttgcggagcgtaaggaa atacagcagcggctgacccatgccggattcaatacccaaggggtcgatggccgcatcggg cccaaaacaacggatgcgatccgtgcttttcaacgcaaccggggtctggtggcggatggc tatgcctcctccgccttgttgcaaaaactgcgatga

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