Roseobacter denitrificans: RD1_0192
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Entry
RD1_0192 CDS
T00376
Name
(GenBank) conserved hypothetical protein
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rde03009
]
RD1_0192
Enzymes [BR:
rde01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
RD1_0192
Ribosome biogenesis [BR:
rde03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RD1_0192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
RlmN_N
Radical_SAM_2
Motif
Other DBs
NCBI-ProteinID:
ABG29921
RoseoBase:
RD1_0192
UniProt:
Q16DM2
LinkDB
All DBs
Position
complement(188122..189306)
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AA seq
394 aa
AA seq
DB search
MPANAPITQDVHTIPRKLPDGPVNLVGLTRAAMRDALIAEGTPEKQAKMRVGQIWQWIYQ
WGVRDFDLMTNLSKAYRAQLKEKFVVEVPEVVTRQVSEDGTRKYLVRIAGGHEVEVVYIP
DEGRGTLCVSSQVGCTLTCSFCHTGTQKLVRNLTAAEIIGQVMVARDDLGEWPEIGAPKD
ETRLLSNIVLMGMGEPLYNFENVRDAMKIAMDPEGIQLSRRRITLSTSGVVPEIARTAVE
IGCQLAVSFHATTDDVRDTLVPINKRWNIEVLLEALRAYPKVSNSERITFEYVMLHGVND
SDEDARRLVKLIDGIPAKINLIPFNEWPGAPYKRSSNNRIRAFADIIYKAGYASPIRTPR
GEDIMAACGQLKSATERARKSRKQIAAETGLAGA
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccaacgcgcctatcacgcaagatgtccacaccattccgcgcaaattgcccgat
ggccccgtcaatctggtgggtctgacccgtgcagccatgcgcgatgcgttgattgccgag
ggcacgcccgaaaaacaggccaagatgcgggtggggcagatctggcaatggatctatcaa
tggggcgtgcgcgactttgatctgatgaccaacctgtccaaggcctatcgcgcgcagctc
aaggaaaaattcgtcgttgaagtcccggaggtcgtcacccgtcaggtcagtgaggatggc
acgcgcaaataccttgtgcgcatcgccggcgggcacgaggtggaggtcgtctatatcccc
gacgaggggcgcgggacgctatgcgtttccagtcaggtggggtgcacgctgacctgttcg
ttctgtcacacaggcacgcaaaagctggtgcgcaacctcaccgctgccgaaatcatcggt
caggtgatggttgcacgcgacgatctgggtgagtggcccgaaatcggggcgcccaaggac
gagacgcggctgctcagcaacatcgtcctgatgggcatgggggagccgctttataatttt
gaaaacgtccgtgacgcgatgaaaatcgccatggaccctgaggggatacaattgtcccga
cgccgcatcaccttgtccacatccggtgtcgtgccggaaatcgcgcgcaccgctgttgaa
atcggctgccagctcgccgtgagctttcacgcaaccaccgatgacgtgcgtgacacgttg
gtcccgatcaacaaacgctggaacatagaggtgctgttggaggctttgcgggcctatccc
aaagtgtccaattcagaacggatcacctttgaatacgtgatgctgcacggcgttaatgac
agcgacgaagacgcccgccgcctcgtcaaactgattgacggcattcccgccaagatcaat
ctgatccctttcaacgaatggcccggcgcgccctacaaacgctcgtccaacaatcgcatc
cgcgcctttgccgatatcatctacaaggccgggtacgcatcgcccatccgaacgccgcgc
ggtgaagacatcatggcggcctgcgggcagttgaaatctgcaaccgaacgcgcgcgcaag
tcccgcaaacagatcgcggcagagacgggtctggcgggcgcataa
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