Roseobacter denitrificans: RD1_0279
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Entry
RD1_0279 CDS
T00376
Symbol
potB
Name
(GenBank) spermidine/putrescine transport system, permease protein, putative
KO
K11071
spermidine/putrescine transport system permease protein
Organism
rde
Roseobacter denitrificans
Pathway
rde02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RD1_0279 (potB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_0279 (potB)
Transporters [BR:
rde02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
RD1_0279 (potB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
ABG30004
RoseoBase:
RD1_0279
UniProt:
Q16DD9
LinkDB
All DBs
Position
complement(271322..272299)
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AA seq
325 aa
AA seq
DB search
MRNEAAAQGSIPQNGADRTFWGRLSGWTAYRTVMGIATASPRRQFLILAAFPILWVLTQH
LGPMVQMLRVSLMDAYPVAPGVEQSFTLDNYARFFGDQIFWQPFFRTLSFAAVFTFCTLI
LTYPVAYFLARHVSRKNRMLLLLLLLIPFWVGEIVRTYAIMILLGNTGAVNLVLQWFGLI
DRPIPFMYTSFSMGVGIVYLTALYMLLPLYSALEKLPDSYNEAAADLGAGAWTRFRRVTL
PLTLEGISSGCTLVFLISTGFYATPVLLGGPSTTVFAQTIAGFFHVAGDEWPTGAAFATI
MFAGAIVLTAVFQKLMYALRKGDTK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacgaggccgcggcccaaggcagcatcccgcaaaacggggccgaccgcacgttc
tgggggcgtctttccggctggacagcgtatcgcacggtgatgggcatcgccaccgcatcg
ccccggcggcagttcctcattctggcggcttttccaatcctttgggtcttgacccagcat
ttaggccccatggtgcagatgctgcgcgtcagcctgatggatgcctatcccgtcgccccc
ggcgtggaacagagcttcacactggacaattatgcgcgcttttttggcgatcagattttc
tggcaacccttctttcgcacgctgagctttgcggcggtttttaccttttgcacgctgatc
ctgacctatccggtggcctatttccttgcgcgtcacgtcagccgcaagaaccggatgtta
ttgttattgttgctccttattccgttctgggtgggggagatcgtgcgcacctatgcgatc
atgatcctcttgggcaataccggagcggtcaatctggtgctgcaatggtttggcctgatc
gaccggcccatccctttcatgtacaccagtttttccatgggggtcggcatcgtttacctg
actgcgctctatatgcttttgccgctttattccgcgctggaaaaactgcccgacagctac
aacgaagccgccgctgaccttggtgccggggcgtggacccgctttcgtcgcgtgacattg
cccctgacgcttgagggaatatcgtcgggctgtacgctggtgttcctgatctcgaccggg
ttttacgccacgccggtgctgttgggcgggccgtccaccaccgtctttgcccagaccatc
gcggggttcttccacgtggcgggggatgaatggcccacgggcgctgcctttgccacaatc
atgtttgcgggtgcgatcgtgctgacggctgtgttccaaaagctgatgtatgcgttgcgc
aagggagacaccaaatga
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