Roseobacter denitrificans: RD1_0332
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Entry
RD1_0332 CDS
T00376
Symbol
ilvD
Name
(GenBank) dihydroxy-acid dehydratase
KO
K01687
dihydroxy-acid dehydratase [EC:
4.2.1.9
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00290
Valine, leucine and isoleucine biosynthesis
rde00770
Pantothenate and CoA biosynthesis
rde01100
Metabolic pathways
rde01110
Biosynthesis of secondary metabolites
rde01210
2-Oxocarboxylic acid metabolism
rde01230
Biosynthesis of amino acids
Module
rde_M00019
Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
rde_M00570
Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
RD1_0332 (ilvD)
09108 Metabolism of cofactors and vitamins
00770 Pantothenate and CoA biosynthesis
RD1_0332 (ilvD)
Enzymes [BR:
rde01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.9 dihydroxy-acid dehydratase
RD1_0332 (ilvD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
Motif
Other DBs
NCBI-ProteinID:
ABG30056
RoseoBase:
RD1_0332
UniProt:
Q16D87
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Position
321157..322920
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AA seq
587 aa
AA seq
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MSSQRFDKSKLPSRHVTEGPSRAPHRSYYYAMGMTEEEIHQPLVGVATCWNEAAPCNIAL
NRQAQSVKMGVKRESGTPREFTTITVTDGIAMGHEGMRSSLASREAIADTVELTMRGHCY
DALVGLAGCDKSLPGMMMAMIRLNVPSVFLYGGSILPGRAPKGASVPAEYADRDLTVQDM
FEAVGHQQNGTLSEAELEVLERVACPSAGACGGQFTANTMACVSEAIGLALPNSAGAPAP
YESRDAYAEASGAAVMNLIEKNIRARDICTREAFENAARIVACTGGSTNAGLHLPAMAHE
AGIDFFLEDVCEIFRDTPYFVDLKPGGQYVAKDMYEAGGVPVVMKELRKAGLLHEDCMTV
TGYSIGEELDKVSLEADGRVVYPIETPLSKTGGVVGLKGNLAPEGAIVKIAGMEPQHLLF
TGPARIFECEQDAFEAVQNRTYKEGDVFVIRNEGPAGGPGMREMLATTAALSGQGMGKKV
ALITDGRFSGATRGFCVGHVGPEAAHGGPIALLKDGDMITLNAIEGTITVDVSDEEMAER
KANWKGARPTIYGAGALWKYAQLVGPTYLGAVTHPGGKDEGHAYMEL
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtccagccagcgctttgataaatccaagctgcccagccgccatgtgaccgagggaccc
tcacgggcgccgcatcggtcctactattacgcgatgggcatgacggaggaagaaatccat
caaccgcttgttggcgtggccacttgctggaacgaggccgccccctgcaacatcgcgctg
aaccgccaggcgcaatcggtcaagatgggcgtgaaacgcgaaagcggcacgccacgtgaa
ttcaccaccatcaccgtcaccgacggcatcgcgatgggccacgagggcatgcggtcgtca
ctggcgtcacgcgaggcaattgccgatacggtggaactgaccatgcgcgggcattgctat
gacgcacttgtggggctggcgggctgcgacaaatccctgccgggcatgatgatggcgatg
atccgtctgaatgtgccatcggttttcctttatggcgggtcaatcctgccgggacgtgcg
cccaagggggcgtcggtgcctgccgaatacgccgaccgcgacctgaccgttcaggacatg
ttcgaagctgttgggcatcaacagaacggcaccctgagcgaggcagaactcgaagtgctc
gaacgcgtcgcctgcccttctgccggggcttgtggcgggcagtttaccgccaacaccatg
gcctgtgtatccgaggccatcggtctggcgttgcccaattccgccggggcacctgcgccg
tacgaatcccgcgacgcctatgccgaagcctcgggtgcggcggtcatgaacctgatcgaa
aagaacatccgtgcgcgcgacatctgcacgcgggaggccttcgagaatgccgcgcgcatc
gtcgcttgtacgggcgggtcgaccaacgccggtctgcacctgcctgccatggcgcatgaa
gcgggcatcgatttcttcctcgaagacgtctgcgagatcttccgcgacacgccctatttc
gtcgatctgaaaccgggcgggcagtatgtcgccaaggacatgtacgaagccggcggcgtg
cccgtggtaatgaaagagctgcgcaaggcaggcctgttgcacgaggactgcatgaccgtc
accggctattccatcggcgaggaactggacaaggtcagccttgaggcggatggccgagtt
gtctatccgattgaaacaccgctgtcgaaaaccggtggcgtcgtcggcctcaagggcaac
cttgcccccgaaggagccatcgtgaaaatcgccggaatggagccgcagcatttgctgttc
accggccctgcgcgaatctttgagtgtgagcaggacgcgtttgaagccgtccagaaccgc
acctacaaagagggcgatgtctttgtcatccgcaacgagggccctgctggcggccccggc
atgcgcgagatgctggcaacgacggcggcgctttcgggtcagggcatgggcaagaaagtc
gcgctgatcacggatggacgtttctcgggggcgacacgcgggttctgcgtcggccatgtg
ggtcccgaggccgcgcacggaggccccatcgccttgctcaaggatggcgatatgatcacg
cttaacgcgatcgaggggaccatcaccgtcgatgtgtccgacgaggagatggccgagcgt
aaagccaattggaaaggggcgcgtccaacgatctatggtgctggtgccttgtggaaatac
gcgcaacttgtggggccaacctatctcggggccgtgacccatccgggcggtaaagacgaa
ggccacgcgtacatggaactgtaa
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