KEGG   Roseobacter denitrificans: RD1_0336
Entry
RD1_0336          CDS       T00376                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K14162  error-prone DNA polymerase [EC:2.7.7.7]
Organism
rde  Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:rde00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rde03400]
    RD1_0336 (dnaE)
Enzymes [BR:rde01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RD1_0336 (dnaE)
DNA repair and recombination proteins [BR:rde03400]
 Prokaryotic type
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    RD1_0336 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger HHH_6 PHP FAD_binding_4 T2SSK
Other DBs
NCBI-ProteinID: ABG30060
RoseoBase: RD1_0336
UniProt: Q16D83
LinkDB
Position
complement(327286..330261)
AA seq 991 aa
MFAELNITSNFSFLKGASHPEEYMSRAAALGIEAIAIADENTVAGIVRAYAQARDIARQV
RERQAWEAANDQIGPALPAGLRVAPATLYATPRLIPAARLVFADACDITALPENRAGWGA
LCRLLSTGRQRAEKGACDLRQQDLLEGGCGLQLILWPQAQGVPCGAGGWVQTARQLTHRF
GGKIHIGLFPQYDGRDPQRFADLTEQARRLGLPTVASAAPVMHHGARRKLADVVTAIRAG
CRVDDLGRDALPNSEARLRSEAEMRRLFKGFDSAVDRAHTLAQSLQFSLDELRYEYPSEI
AENETPSGRLRRLAYEGLAWRYPAGASDKVHRLLEHELTLIGKLKYEPYFLTVRDIVAFA
RSRDILCQGRGSAANSVVCYCLGVTSVSPEIGTMVFERFVSEARNEPPDIDVDFEHERRE
EVIQHIYERYGRHRAGLCATVVHYRVKRAIREVGRAMGLSEDTISALSSQLWGFFSTKGI
EAERMAEIGLDANDRRLQQTLALVHEINGFPRHLSQHVGGFVITEGRLDELVPIENATME
GRTVICWDKDDIEALGILKVDVLSLGMLTCIRKAFDLMQMHHNVSHTLASLPPEDPAVYD
MLCRADSIGVFQVESRAQMNFLPRMRPRCFYDLVIEVAIIRPGPIQGDMVHPYIRRRNGE
EEVSFPSDELGEVLGKTLGVPLFQEQAMQIAIVGAGFTPDQADRLRRSLATFKKHGNVSE
FKNLFLRGMKRKGYDDDFAERCFSQIEGFGSYGFPESHAASFALLVYASSWIKCHHPGIF
ACALLNSQPMGFYAPAQIVRDAREHGVDVRPICINASFWDNVMEPDGRGGLALRLGFRQI
KGISEEDATWLTAARGNGYRSVRDVWRRAGLQPVMIERLAEADVFAALDLNRRAALWEAK
ALVPGAPLPLFAGDIDGEAIDEPAALLPEMTLGEEVVEDYVAMRLTLRAHPMALLRHRLT
PQPGASPAPLAPAEGKAPDLSKLSYTRGNPD
NT seq 2976 nt   +upstreamnt  +downstreamnt
atgtttgctgaactcaatatcacctctaatttttccttcctcaaaggggcgtcccacccg
gaggaatacatgtcccgtgcagcggcactgggtatcgaagccattgcgattgcggatgaa
aacacggttgcaggcattgtccgcgcctatgcgcaggcgcgtgacattgcccggcaggtg
cgcgagcggcaggcgtgggaggccgcaaatgatcagatcggcccggccctgccggcgggg
ctgcgtgtggcgcctgcgaccctttacgcaacgccgcgcctgatcccggcagcccggctg
gttttcgcggatgcttgcgacatcacggccctgccggaaaaccgcgcaggatggggcgcc
ctgtgccgcctgctttcaacgggacggcagcgagccgaaaaaggggcctgtgacttgcgc
cagcaagacctgctggaagggggatgcgggctgcaattgatcctctggccacaggcgcag
ggggtgccgtgcggcgcgggtggatgggtgcaaaccgcgcgacagctgacgcaccgtttt
ggcgggaaaattcatatcggccttttcccacagtatgatggccgtgaccctcagcgcttt
gcagacctcaccgaacaggcgcggcgtctcggcttgccgacagtggccagtgcggctcct
gtcatgcatcacggtgcgcgccgcaagcttgcagatgttgtaaccgccatccgcgcgggc
tgccgcgttgatgatctgggccgcgacgccttgcccaacagcgaggcacgcctgcgttca
gaggccgagatgcgccgccttttcaaagggtttgattccgccgtggaccgcgcccacacc
cttgcccaaagcctgcaattctcactggatgaactgcgctatgaatacccgtcagagatt
gcggagaatgaaaccccatcgggccggttgcgccgtctggcctatgaggggctcgcatgg
cgctacccggcaggggcctccgacaaggttcaccgcttgctggaacatgaactcaccctc
atcggcaagttgaaatacgaaccctatttcctgaccgtgcgcgacattgtggcctttgcc
cggtcgcgtgacatcctgtgtcaggggcgcgggtccgcggccaattcggtggtttgttat
tgtctgggtgtcacctccgtctcccccgaaatcggcacgatggtgtttgagcgtttcgtg
tcagaggcgcgcaacgaacccccggacatcgacgtggatttcgaacatgagcgccgcgaa
gaagtcatccagcacatctatgaacgctatggccgccaccgcgcggggctttgcgcgacg
gtcgtgcactaccgggtcaaacgcgccatccgcgaggtgggccgcgccatggggctgagc
gaagatacgatctctgccctctcctcacagctttgggggttcttttccaccaaggggatc
gaagcggaacgcatggccgaaatcgggctggatgcgaatgaccgccgcctgcagcagacc
cttgcactcgtccatgagatcaacggctttccccgccacctcagccaacacgtcggcgga
tttgtcatcaccgaagggcggcttgacgaactggtccccattgaaaacgccacgatggaa
gggcgcaccgttatctgctgggacaaggatgacatcgaggcgctcggtatcctcaaggtt
gatgtgctgtcactgggcatgctcacctgtatccgcaaggcgtttgatctgatgcagatg
caccataatgtcagccacacgctggcctcgctgccgcccgaggatccagcagtttacgat
atgctgtgccgcgcggacagcatcggggtgtttcaggtggaaagccgcgcgcagatgaat
ttcctgccgcgcatgcgcccgcgttgtttctatgatctggtgattgaggtcgcgatcatc
cgccccggccccattcagggcgatatggtgcatccctacatccgccgccgcaatggcgaa
gaagaggtctcctttccttccgacgagttgggcgaggtgctgggcaagacgctgggcgtg
ccgctgtttcaggaacaggcgatgcagatcgccattgtcggcgcgggctttacccccgat
caggcggaccgtctgcgccgttcgctggcgaccttcaagaagcacgggaacgtcagtgaa
ttcaagaacctgtttctgcggggcatgaaacgcaaaggctatgatgatgattttgccgaa
cgctgcttcagccagatcgaaggctttggatcctatgggtttcccgaaagccacgcggcc
agttttgcgctgttggtctatgcttcgtcctggatcaaatgccaccaccccggcatcttt
gcctgcgcgctgctgaattcgcagcccatggggttttacgcccccgcccagatcgtgcgg
gacgcacgcgagcatggggtcgatgtgcggcccatctgcatcaacgccagtttctgggat
aatgtgatggagccggacgggcgcggcggtctcgccctgcggctggggtttcggcagatc
aagggcatcagcgaagaggacgccacgtggctgacagcggcgcgcggcaacggctatcgc
tccgtgcgcgatgtatggcgacgggccgggctgcagccagtgatgatcgaacgtcttgcc
gaggcagatgtttttgccgccctcgaccttaatcgccgcgctgccctctgggaggccaag
gcgctggtgccgggcgcgccgctgccgctgtttgcaggcgatatcgacggagaagccatt
gatgaacccgcagccctgttgcccgaaatgacattgggcgaagaggtggtcgaggattat
gtcgccatgcgcctgacgctcagggcgcatccgatggcgctgctcaggcaccggttgacc
ccacagccgggggccagccccgcgccccttgcacccgcagagggcaaagcacccgatctg
tccaaactcagctatacgcgcggtaatccggactag

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