Roseobacter denitrificans: RD1_0372
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Entry
RD1_0372 CDS
T00376
Name
(GenBank) sigma-54 modulation protein, putative
KO
K05808
ribosome hibernation promoting factor
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rde03009
]
RD1_0372
Ribosome biogenesis [BR:
rde03009
]
Prokaryotic type
Other maturation factors
RD1_0372
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S30AE
Ribosom_S30AE_C
DUF2390
DIT1_PvcA
5_3_exonuc_N
Motif
Other DBs
NCBI-ProteinID:
ABG30092
RoseoBase:
RD1_0372
UniProt:
Q16D51
LinkDB
All DBs
Position
364678..365244
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AA seq
188 aa
AA seq
DB search
MRYQISGKQIDIGEALQTHVREELSEAVKKYAERPTEAVVVFSKSAHEFVCEATVHLSTG
LTAQAKAHQTEIYAAFDACREKMEKQLRRYKRRLKDHHKDRAEPVEIYGASSYILASEVE
SEDQEPETLQPIIVAEMETKIPSLSVGEAVMQMELQGAPVLVFRNEGKEGVNVVYRRDDG
NIGWIDPK
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgcggtatcaaatcagcggcaaacagatcgatattggtgaagcacttcagacccacgta
cgcgaggaactcagcgaagcggtcaagaagtatgccgagcgcccgaccgaggccgttgtt
gttttctccaaatcggcccatgagtttgtttgcgaggcaacggtacatctgtcgaccggg
ctgacggcacaggccaaggcgcatcagacggagatatacgcagcatttgatgcctgtcgc
gagaaaatggaaaagcagctgcgtcgctacaagcgtaggttgaaagatcatcataaagat
cgggccgagcctgttgaaatctacggcgcgtcctcatatatcctcgcatcagaagttgag
tcggaggatcaggagcccgaaacgctgcaaccgatcattgtggctgaaatggagacgaag
atcccctctctttccgtgggcgaggccgtcatgcaaatggagcttcaaggtgctcctgtt
ctggtgtttcgcaacgaaggcaaggaaggcgtgaatgttgtataccgtcgggatgatggg
aacatcggctggatcgatcctaagtag
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