Roseobacter denitrificans: RD1_0421
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Entry
RD1_0421 CDS
T00376
Symbol
tme
Name
(GenBank) NADP-dependent malic enzyme
KO
K00029
malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:
1.1.1.40
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00620
Pyruvate metabolism
rde00710
Carbon fixation by Calvin cycle
rde01100
Metabolic pathways
rde01120
Microbial metabolism in diverse environments
rde01200
Carbon metabolism
Module
rde_M00169
CAM (Crassulacean acid metabolism), light
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
RD1_0421 (tme)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
RD1_0421 (tme)
Enzymes [BR:
rde01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.40 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+)
RD1_0421 (tme)
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Gene cluster
GFIT
Motif
Pfam:
PTA_PTB
malic
Malic_M
ELFV_dehydrog
ThiF
Motif
Other DBs
NCBI-ProteinID:
ABG30137
RoseoBase:
RD1_0421
UniProt:
Q16D06
LinkDB
All DBs
Position
complement(410385..412640)
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AA seq
751 aa
AA seq
DB search
MTKNRVTAEEALAFHLEPTPGKFEVTATVPMTTQRDLSLAYSPGVAVPCEAISQNPETAY
DYTNKGNLVAVVSNGTAVLGLGNLGALASKPVMEGKAVLFKRFADVNSIDIELDTEDTDA
FINAVKLMGPTFGGINLEDIKAPECFIIEQRLKDEMDIPVFHDDQHGTAVICAAGLINAL
HLSDKKIEDVRIVLNGAGAAGIACLELLKAMGARHQNCIMCDTKGVIYQGRAEGMNQWKS
GHAVATEARTLEDAMKGADVFLGVSVKGAVTEAMIASMADDPVIFAMANPDPEITPEEAH
AVRADAIVATGRSDYPNQVNNVLGFPYLFRGALDIHARAINDEMKIACAHALAALAREDV
PDEVALAYGKNLSFGRDYIIPTPFDPRLIHRVPPAVAKAGMDTGAARRPIIDMEAYELSL
KTRMDPTASILRGINARARANQARMIFAEGDDARVLRAAVMYQRSGLGKALVVGRKEDVK
DKLEQAGMPDAVREIEIVNAANTTHLDTYKDFLYSRLNRGGFDAQDIHRLAARDRHVFSA
LMLAHGHGDGLVTGATRKSAHIMDRINHVFDADVKSGAAGITAILHKGRIVFIADTLVQE
WPDEEDLANIAERAATVARNMGLEPRVAFVSFSTFGYPVSERATKMADAAKVLDARGVTF
EYEGEMTVDVAMNTTVQASYPFSRLTGPANILVVPARHSASISVKLMQEMAGATVIGPIL
SGVDRSIQICSTGATANDILNMAVLAACKVG
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaaccgcgttacggcagaagaggcgctcgcctttcatctggagccgaccccc
ggaaagttcgaggtaacggccaccgtaccgatgacgacgcagcgggacctcagtcttgcc
tattcgccgggcgtcgcggtcccttgtgaagcgatttcgcaaaaccccgaaaccgcctat
gattacaccaacaagggcaaccttgtggccgtcgtgtccaacgggacagcggtcttgggt
ctggggaaccttggcgcgctggcctccaaaccggtgatggaaggcaaggcggttttgttc
aaacgcttcgcggatgtgaacagcatcgacatagagttggacaccgaagacacggatgcc
ttcatcaatgcggtcaagctgatgggcccgacctttggcggcatcaacctcgaagatatc
aaggcgcctgagtgtttcatcatcgaacaacgtctcaaggacgaaatggacatccccgtc
tttcatgacgaccaacacggcactgcggtgatctgtgctgcgggtctgatcaacgcgctg
cacctgtcggacaaaaagatcgaagatgtgcgcattgtcctgaacggggccggggctgcg
gggatcgcctgtcttgaattgctcaaggcgatgggcgcgcggcaccagaattgcatcatg
tgtgacaccaagggcgtgatctatcagggccgtgcggagggcatgaaccagtggaaatcg
ggccatgccgtcgccactgaggcgcgcaccttagaggacgcgatgaagggggcggatgtc
ttccttggtgtgtctgtcaaaggggctgtgaccgaagcgatgattgccagcatggcagat
gacccggtgatctttgccatggccaaccccgacccggaaattacgcccgaagaggcgcat
gccgtgcgcgcggatgccatcgttgccacgggccgcagtgactatcccaatcaggtcaac
aatgttctcgggtttccgtacctctttcgcggcgcgctcgacattcatgcccgcgcgatc
aatgacgagatgaagattgcctgcgcccacgcccttgcagcgctggcgcgcgaggatgtg
ccggatgaggtcgcactggcctatggcaaaaacctgtccttcgggcgggattacatcatt
ccgacgccgtttgacccgcgtctgatccaccgtgtgccgcccgccgtggccaaagcgggt
atggatacaggtgccgcgcgccgcccgatcatcgacatggaagcctatgaactatcgctc
aagacccggatggatccgacggcgagtatcttgcgtggcatcaatgcgcgtgcgcgggca
aatcaggctcggatgatttttgccgaaggggatgatgcgcgcgtgttgcgcgcggcggtg
atgtatcaacgctccggtctgggcaaagcgttggtcgtggggcgcaaggaagatgtgaag
gacaagctggagcaggccggtatgcccgacgcggtgcgcgagattgagatcgtgaatgcc
gcgaatacgacgcatctcgatacctacaaggattttctctatagcaggctgaaccggggc
ggctttgacgcgcaggacattcaccggctggcggcgcgggatcggcatgtcttttccgcg
ctgatgctcgcgcatggtcacggcgatgggcttgtcactggcgcgacgcgcaaatcggcg
catatcatggaccggatcaaccacgtctttgacgcggatgtcaaaagtggtgctgcgggg
atcacggcaattctgcacaaggggcggatcgttttcatcgcggacacgctggtgcaggaa
tggcccgacgaagaagatctggccaatatcgccgaacgcgcagcgaccgttgcccggaac
atggggctggagccgcgtgtcgcctttgtcagtttctcgacctttggttatccggtttcg
gagcgggcgaccaaaatggcggatgcggccaaggttctggacgcgcgcggtgtcaccttc
gaatacgaaggcgagatgaccgtcgatgttgctatgaacacaacggtgcaggcgagctat
ccgttttccagactgaccggtcctgcgaatatccttgtcgtgccggcgcgccattctgcc
agcatttcggtgaaactgatgcaggaaatggcaggggcgacggtgattgggccgattctg
tccggtgtggatcgctcaattcagatttgttcgaccggggcgacggccaatgacatcctg
aacatggccgtgttggcggcctgcaaggtcggctga
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