Roseobacter denitrificans: RD1_0471
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Entry
RD1_0471 CDS
T00376
Symbol
hemD
Name
(GenBank) uroporphyrinogen-III synthase, putative
KO
K01719
uroporphyrinogen-III synthase [EC:
4.2.1.75
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00860
Porphyrin metabolism
rde01100
Metabolic pathways
rde01110
Biosynthesis of secondary metabolites
rde01120
Microbial metabolism in diverse environments
rde01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RD1_0471 (hemD)
Enzymes [BR:
rde01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
RD1_0471 (hemD)
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Motif
Pfam:
HEM4
Motif
Other DBs
NCBI-ProteinID:
ABG30181
RoseoBase:
RD1_0471
UniProt:
Q16CW2
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Position
457543..458247
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AA seq
234 aa
AA seq
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MQKIPLILTRPKGSNAVFEADIAPKVRQHVDFIHSPLLEIVPIDGGYDSTGADHAIFTSA
NGVKYAPKGNGRRAFCVGEKTTQLARSHGWDAVFAGATVLALKDHVLINRPQGEIHHYSG
VFVRGNVAEDLSVAGLRVTNIPLYEQRLLPFSAQALSVLERRAPVVVPLFSPRTAAHFAA
IAPAHPQLYVVAMSTAVADSCNEMSPARLIIAREPTAKSMALCVENLVLNHSLG
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaaagattccgctcatcctgacgcgaccgaaggggtcgaacgccgtcttcgaagcg
gacattgcgccaaaggtgcgccagcatgtggatttcattcacagcccgctgcttgaaatc
gtgccgattgatggagggtatgactcgacgggcgcggatcatgcaattttcacatcggcc
aatggcgtgaaatatgcgcccaagggaaacgggcgacgcgcattctgtgtcggtgagaaa
acgacgcaactggcacgttcgcatggatgggacgcggtgtttgccggtgcgaccgttttg
gcgctgaaagaccatgttctgatcaaccgtccccaaggtgaaatccatcactattcaggc
gttttcgtgcgcggcaatgtcgccgaggatttgtcggttgcgggtttgcgtgtcacgaat
atcccgctttatgagcagcgccttttgcccttttcggcgcaggcattgtcggttttggag
cgtagagcacctgttgtggtgccgcttttttcaccgcggacggctgctcatttcgcagca
atcgcaccggcgcatccacagttatatgttgtcgccatgagcacggcagtcgcggattcc
tgcaatgaaatgtcccctgcaaggctgatcattgcgcgagagcccactgcaaaatccatg
gctctctgtgtggaaaaccttgttctgaaccacagcttgggttga
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