Roseobacter denitrificans: RD1_0625
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Entry
RD1_0625 CDS
T00376
Symbol
glcD
Name
(GenBank) glycolate oxidase, subunit GlcD
KO
K00104
glycolate dehydrogenase FAD-linked subunit [EC:
1.1.99.14
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00630
Glyoxylate and dicarboxylate metabolism
rde01100
Metabolic pathways
rde01110
Biosynthesis of secondary metabolites
rde01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RD1_0625 (glcD)
Enzymes [BR:
rde01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.14 glycolate dehydrogenase
RD1_0625 (glcD)
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Gene cluster
GFIT
Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
ABG30325
RoseoBase:
RD1_0625
UniProt:
Q16CG8
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All DBs
Position
605531..606985
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AA seq
484 aa
AA seq
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MSMEMPVPDAAILARKARLVERLQSVVPADAVIHDPHQTRAYECDALTAYKCPPMAVVLP
ASTKEVSDVLRICHEDGVPVVPRGSGTSLAGGALPTADCVILGVARMNDVLETNYDDRYI
RVESGRTNLSVTGAVEEDGFFYAPDPSSQLACAIAGNIAMNSGGAHCLKYGVTTNNLMGV
TLVMMDGEIVEVGGAHMDSAGLDLLGLICGSEGQLGVVTEATLRILPKPEGARPVLMGFD
DSEVAGACVSDIIKAGVLPVAIEFMDRLCIETSENFAQAGYPMCEALLIVEVEGSEAEID
HQLDLIMEIARRHDPVELRQSTSAEESALIWLGRKSAFGAIGQINDYMCLDGTIPVSSLP
FVLRRIGEMSKEFGLQVGNVFHAGDGNMHPLILFDANKPGDLERCEALGAEILKLCVEAG
GCLTGEHGVGIEKRDLMEYQFAPDDLEAQMAIKDVFDAQWLLNPAKVFPLSVSQNRRMLA
IAAQ
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatggagatgcctgtacctgatgccgcgattctggcccgcaaggcgcggctggtg
gagcgtctgcaatccgtggttccagccgatgcggtcatccatgatccgcaccaaacacgc
gcttacgagtgtgacgcactgacggcgtataaatgcccgccgatggctgttgtgttgccg
gcgtccaccaaagaggtgtcggatgtgctgcgcatttgtcacgaggatggcgtgcccgtc
gtgccgcgcggctctggtacgtctctggccgggggggctttgcccacggcggattgcgtg
atccttggcgtggcgcgcatgaatgacgtgctggaaacgaattatgacgaccgctacatc
cgcgtggaatcggggcgcacgaacctcagcgtgaccggcgccgtggaagaagacgggttc
ttttacgcgcccgacccttccagccagttggcctgtgccatagcgggcaacatcgcgatg
aattcaggcggtgcgcattgcctgaaatatggcgtgaccaccaacaacctgatgggcgtg
acgctcgtgatgatggatggcgaaatcgtcgaggtgggcggcgcgcatatggattcggcg
ggtctcgatctgctcggtctgatctgtggttccgaagggcagttgggcgtcgtgaccgaa
gccaccctgcggattttgcccaaacccgaaggcgcgcgacccgtccttatggggtttgac
gacagtgaggttgcgggcgcctgtgtcagcgacatcatcaaggcgggcgtcctgccggtt
gcgattgaattcatggaccggctgtgcatcgagacgagcgaaaatttcgcacaggcaggc
tatccgatgtgcgaggcgttgctgatcgtcgaggtcgaaggatcagaggccgagatcgac
catcaactggacctcatcatggagatcgcgcgccgccatgacccggtcgaattgcgccaa
agcacctctgcggaggaaagcgcgttgatctggctggggcggaaatccgcctttggggcc
atcgggcaaatcaacgattacatgtgtctggatgggacgatcccggtatcttcgctgcct
ttcgtcttgcgccgcattggcgagatgtccaaagagttcggcctgcaggtcggcaatgtg
tttcatgcgggggacggcaacatgcacccgttgatcctgtttgatgccaacaagccgggt
gatctggaacgctgcgaagcgcttggcgcggaaatcctcaagctctgtgtcgaagcgggc
ggatgcctgaccggagaacacggtgtcgggatcgaaaagcgtgacctgatggaataccaa
ttcgcgcccgacgatctggaggcgcagatggccatcaaggacgtgttcgatgcccaatgg
ctgttgaacccggccaaagtctttccgctttccgtttcacaaaaccgtcggatgcttgcc
attgcggcgcagtaa
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