Roseobacter denitrificans: RD1_0627
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Entry
RD1_0627 CDS
T00376
Symbol
glcF
Name
(GenBank) glycolate oxidase, iron-sulfur subunit
KO
K11473
glycolate dehydrogenase iron-sulfur subunit [EC:
1.1.99.14
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00630
Glyoxylate and dicarboxylate metabolism
rde01100
Metabolic pathways
rde01110
Biosynthesis of secondary metabolites
rde01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RD1_0627 (glcF)
Enzymes [BR:
rde01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.14 glycolate dehydrogenase
RD1_0627 (glcF)
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GFIT
Motif
Pfam:
CCG
Fer4_8
Fer4_17
Fer4_7
Fer4_10
Fer4_9
Fer4_16
Fer4_6
Fer4
Fer4_4
Fer4_2
Fer4_21
Fer4_18
Cytochrom_C552
Fer4_3
Neurochondrin
Chromosome_seg
Motif
Other DBs
NCBI-ProteinID:
ABG30327
RoseoBase:
RD1_0627
UniProt:
Q16CG6
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All DBs
Position
608182..609507
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AA seq
441 aa
AA seq
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MQTTFTPEQMKNPEIQRSNEILRSCVHCGFCTATCPTYQVLGDELDSPRGRIYLIKDMLE
NDRDPDAKTVKHIDRCLSCLACMTTCPSGVHYMHLVDHARAYIEERYKRPFSDRALRWVL
ARILPYPMRFRLALLGAKIGRPFARFMPDARLQAMLEMAPKTIPPVSRNDDPQSFAPEIE
RKKRVALMTGCAQKALNTDINDATIRVLRRLGCEVVVAKGAGCCGALTHHMGKSDESHST
AARNIRAWAREMDAGGLDAIVINTSGCGTTVKDYGHMFRNDPALAEDAARVSAIAKDVSE
VLVDLDMPAGEDKAMVVGYHAACSLQHGQQIKTFPKDLLKRAGFTVVEPRDSHLCCGSAG
TYNLMQPEISKQLKARKVQTLEAKNPDVIAAGNIGCMMQIGSGTEIPVVHSVELLDWATG
GPRPPSLDGDAMPKSDVPILR
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgcagacaacattcacaccggagcagatgaaaaacccggaaatccagcgcagcaacgag
attttgcgctcctgcgtgcattgcgggttctgcaccgccacctgcccgacctatcaggtg
ctcggggatgaattggacagcccgcgcgggcggatttatctgatcaaggatatgcttgag
aacgaccgtgatccggatgcgaaaacggtcaaacatattgaccgctgcctgtcctgtctt
gcctgcatgaccacctgcccgtcgggcgtgcattacatgcatctggtcgatcacgcgcgc
gcctacatcgaagaacgttacaagcggccgttcagtgaccgcgcgctgcgttgggttctg
gcgcgtatcctgccctatcccatgcggttccgtctggccctgctgggtgccaagatcggg
cgtccttttgcacggtttatgccggatgcgcggttgcaagccatgctggagatggcgccc
aagaccatcccgcccgtcagccgcaatgacgatccgcagagttttgcaccggagattgaa
cgtaaaaaacgcgtggccctgatgaccggctgtgcgcaaaaggcgctgaataccgacatc
aatgacgcgacgatccgcgtgctgcggcgtttgggctgcgaggttgtcgtggccaaaggg
gcgggttgttgtggcgctctgacccatcacatgggcaagtcagatgaaagccactcaacg
gcggcgcgcaatattcgcgcatgggcgcgggaaatggatgcgggcggtctggacgcgatt
gtgatcaatacatccggctgtgggacgaccgtgaaagactacggtcatatgtttcgcaac
gatccggccttggcagaggatgccgcgcgcgtctcggcgattgccaaagatgtctccgaa
gtgctggttgatctggacatgcctgccggtgaggacaaggcgatggtcgtggggtatcac
gcggcctgctcgctgcaacacggtcaacagatcaagaccttcccaaaggatttgttgaaa
cgcgccggttttaccgtcgtcgagccgcgcgattcgcatctgtgctgtggctctgcgggg
acatacaacctgatgcagccagagatttccaaacagctcaaagcgcgcaaggtgcaaacg
ctggaggcgaaaaacccggacgtcatcgcggcaggtaatatcgggtgcatgatgcaaatc
ggctctggcactgagattccagtggttcacagtgttgaattgctggactgggccacgggc
gggccgaggccaccgtcgctggatggcgatgcgatgccaaaatccgacgtgccgatcctg
cgctga
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