Roseobacter denitrificans: RD1_0661
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Entry
RD1_0661 CDS
T00376
Symbol
deoC
Name
(GenBank) deoxyribose-phosphate aldolase
KO
K01619
deoxyribose-phosphate aldolase [EC:
4.1.2.4
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00030
Pentose phosphate pathway
rde01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
RD1_0661 (deoC)
Enzymes [BR:
rde01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.4 deoxyribose-phosphate aldolase
RD1_0661 (deoC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoC
Motif
Other DBs
NCBI-ProteinID:
ABG30359
RoseoBase:
RD1_0661
UniProt:
Q16CD4
LinkDB
All DBs
Position
complement(642218..643174)
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AA seq
318 aa
AA seq
DB search
MPQVVEPRNPGMDLDMDWVMRLQANTSAIERRAATLPARRSVKKAHQAAWLLRAITCIDL
TTLSGDDTERRVERLCAKAMHPVSDSLLSALGVDDIKTGAVCVYHEMIPAALRALEGSGI
PVAAVSTGFPAGLSPLHLRIAEIEESVAAGAAEIDIVISRRHVLTGNWQALYDEMRAFRA
ACGNAHVKAILATGELGSLRNVARASMVCMMAGADFIKTSTGKESVNATLPVTLVMIRAI
RDYYERSGYRVGYKPAGGISKAKDALTYLALIKEELGTAWLAPNLFRFGASSLLNDIERQ
LEHHVTGQYSAGYRHATS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
ttgccgcaggtcgttgagccgcgcaatccggggatggatctggacatggattgggtgatg
cgcctgcaggccaatacctctgccattgaacgccgcgcggcaacattgcccgcacgccgc
tctgtcaaaaaggcgcatcaggcggcgtggttgctgcgcgcgatcacctgtatcgacctc
acaacgctgtctggcgatgataccgaacggcgcgtcgaacgcctgtgcgccaaggcgatg
cacccggtgtcggacagcttgctgagcgcacttggcgtggatgacatcaaaaccggcgcg
gtctgcgtctatcacgaaatgatcccggcggcgctgcgcgcgcttgaggggtccggcatt
ccggtggcggcggtcagcacggggtttcccgcagggctttccccgctacatctgcgcatc
gcggaaatagaggagagcgtggcagcgggtgcggcagaaatagacatcgtgatttcacgc
cgccatgtgctgaccggcaactggcaggccctttatgacgaaatgcgcgccttccgcgcg
gcctgcgggaacgcgcatgtaaaggccatcctggctaccggcgaattgggcagcctgcgc
aacgtggcgcgcgcctcgatggtgtgcatgatggccggggcggatttcatcaaaacctcg
accggcaaggaaagcgtcaacgccacgctgcctgtcacattggtcatgatccgcgccatc
cgggactattacgaacgcagcggttaccgcgtcggctacaaaccggcagggggcatttcc
aaggccaaggacgcgctcacctatctggcgctgatcaaggaagagcttggcacagcgtgg
cttgcgccgaacctgtttcgatttggcgcatcctcgctactcaacgacatcgagcggcag
ttagaacaccatgtgaccggccagtattccgccgggtatcgtcatgccaccagttaa
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