Roseobacter denitrificans: RD1_0708
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Entry
RD1_0708 CDS
T00376
Name
(GenBank) conserved hypothetical protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
rde
Roseobacter denitrificans
Pathway
rde02010
ABC transporters
rde02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RD1_0708
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RD1_0708
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_0708
Transporters [BR:
rde02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
RD1_0708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
TSC21
Motif
Other DBs
NCBI-ProteinID:
ABG30403
RoseoBase:
RD1_0708
UniProt:
Q16C90
LinkDB
All DBs
Position
685313..686596
Genome browser
AA seq
427 aa
AA seq
DB search
MKHKIGTWAVAAVMAASPVMADLVFPSLSYRTGPYAANGIPFADGYADYFTLLNERDGGI
GGVMTRVPECETGYNTEKGVECYESTKGEGALVYQPLSTGITYQLIPKATADGIPVHSMG
YGRTSAKDGTVFRNIFNYPANYWDGASFAIKHLLDVNDGSLEGKKIALVYHNSAYGKEPI
RTLEELSEKHGFELMLLAVDHPGQEQKSQWLQIRRERPDNVIMYGWGVMNQVAIQEAANI
RFPMENFIGIWWSGSENDVRPAGAAADGYKALAFHNVGSDFPVFDDIQKYVVDAGKAAGA
GDQIGTVLYNRGLYAAMLAAEAARTAQEIHGVAEITAPMMRDGMEALKITEEKMAALGLP
GFGPAFEVSCENHGGGGFVAMAQWSGTNDQWTLISDYEQSDQDVIGPLIAEDAAAFAAEN
NITPGCD
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacaaaataggaacctgggccgttgcggccgtgatggcggcaagtccggtgatg
gcggaccttgtctttccgtcgctgagctaccgcacgggcccatatgcggcgaacggcatc
ccctttgcggatggctatgcggattacttcacgctgctgaatgaacgcgacggcgggatc
ggcggtgtcatgacgcgggtgccggaatgcgaaaccgggtataacacggaaaaaggggtt
gagtgttacgagagcaccaagggggagggcgcgctggtctatcaacccctgtcgaccggc
atcacctatcagctgatccccaaggcgacggcggatggcatcccggttcattcgatgggc
tatggccgtacctctgccaaggatggcacggtgtttcgcaacatctttaactaccctgcg
aactattgggatggtgcgtcctttgcgatcaagcatctgctggacgtgaacgacggatcg
cttgagggcaagaagatcgcgctggtctatcacaactccgcctatggcaaggagccgatc
cgcaccctcgaagaactgtcggaaaagcacgggttcgagttgatgttgctggccgtggat
caccccgggcaggaacagaaatcgcagtggttgcagattcgtcgcgaacgccctgataat
gtcatcatgtacggctggggggtgatgaatcaggtcgccattcaggaagccgcgaacatc
cgtttcccgatggagaatttcatcggcatctggtggtctggctctgaaaatgacgtgcgt
cctgctggcgctgctgctgatgggtacaaagcgttggccttccacaatgtcggcagtgat
ttcccggtgtttgacgacatccagaaatacgttgttgatgcaggcaaggccgcaggtgcc
ggggatcagatcggtacggttctgtataaccgcggcctttatgcggcgatgttggcggca
gaagcggccaggaccgcgcaggaaatccacggcgtggccgagattacggcacctatgatg
cgcgatggcatggaggcgctcaagatcaccgaagagaagatggcggctctgggtctgccg
ggctttggtcctgcgtttgaagtatcctgcgaaaaccacggcggtggtggcttcgtcgcc
atggcgcagtggagcgggacaaatgaccagtggacgctgatttccgattacgaacagtcg
gatcaggatgtcatcgggccattgatcgccgaggatgccgcagcctttgcagccgaaaac
aacatcacaccggggtgtgactaa
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