Roseobacter denitrificans: RD1_0721
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Entry
RD1_0721 CDS
T00376
Symbol
clpB
Name
(GenBank) ATP-dependent Clp protease, ATP-binding subunit ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rde03110
]
RD1_0721 (clpB)
Chaperones and folding catalysts [BR:
rde03110
]
Heat shock proteins
HSP100
RD1_0721 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
Clp_N
AAA_22
AAA_16
Sigma54_activat
nSTAND3
ATPase_2
TniB
RuvB_N
IstB_IS21
AAA_7
AAA_18
Mg_chelatase
bpMoxR
AAA_14
AAA_24
AAA_25
AAA_3
NACHT
DUF7310
T2SSE
MTR4-like_stalk
CFAP141
NBD_SMAX1
Motif
Other DBs
NCBI-ProteinID:
ABG30412
RoseoBase:
RD1_0721
UniProt:
Q16C81
LinkDB
All DBs
Position
696573..699191
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AA seq
872 aa
AA seq
DB search
MDLSKFTERSRGFIQAAQTIAARESHQRLAAEHLLKALMDDDQGLASNLISAAGGQPARV
LESVDLALGKMPKVTGDAAQVYVDGTTTKVLAEAEQLAKKAGDSFVPVERILMALCMVKS
GAKTALDAGNVTAQALNGAINDVRKGRTADTATAEEGYDALKKYAMDLTERAEAGKIDPI
IGRDEEIRRAMQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLRNKKLLAL
DMGALIAGAKFRGEFEERLKAVLTEVTEAAGEIILFIDEMHTLVGAGKADGAMDAANLIK
PALARGELHCVGATTLDEYRKYVEKDAALARRFQPVMVQEPTVEDTVSILRGIKEKYELH
HGVRISDSSLVAAATLSHRYITDRFLPDKAIDLMDEAASRLRMEVDSKPEELDAIDRQIL
QMQIEAEALRLEDDAASKDRLETLEKELAELQERSDAMTAKWQAERDKMAGARDLKEQLD
HARAELEIAKREGNLGRAGELSYGVIPQLEKQLEAAEGRDDGDVMVEEAVRPEQIASVVE
RWTGIPAGKMLEGERDKLLRMEDQLHGRVIGQNSAVRAISNAVRRARAGLNDENRPLGSF
LFLGPTGVGKTELTKAVAEFLFDDDNAMVRIDMSEFMEKHAVARLIGAPPGYVGYDEGGV
LTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRTVDFKQTLIVLTSNLG
AQALSQLPDGADASAAKRDVMDAVRAHFRPEFLNRLDETIIFDRLGRADMDGIVEIQMAR
LLKRLAGRKIALELDDAARMWLADEGYDPVFGARPLKRVIQRALQDPLAEMILAGDVKDG
DVIQVSVGSEGLLIGDRVAATNRPKPDEAVVH
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggacttgagcaagttcacggaacggtcgcgcggtttcatccaggcggcacagacgata
gcggcgcgcgaaagccatcagaggctggccgccgaacacttactgaaagcattgatggac
gatgatcaggggctggccagcaatctgatctcggccgcgggcgggcaaccggcgcgggtt
ctggagtctgttgatctggcactgggtaaaatgcccaaggtgacaggcgatgcggcacag
gtatatgtggatggcaccacgaccaaggttctcgccgaggcggagcaactggccaagaag
gccggtgacagctttgtccccgtcgaacgtatattgatggcgctgtgcatggtgaaatcg
ggggccaaaacggccttggatgcaggaaatgtaactgcgcaggcgttgaacggtgcgatc
aatgatgtgcgcaaggggcgcacagcggacacggccactgccgaagaaggctatgacgcg
ttgaagaaatacgcgatggacctgacggagcgggccgaggcgggcaagatcgacccgatt
atcgggcgggacgaggaaatccgccgcgccatgcaggttctgagccgccggaccaagaac
aacccggtgctgatcggggagccgggtgtcggtaaaaccgcgattgccgaaggattggcc
ctgcggatcgtgaacggcgatgtgcctgaatccctgcgcaacaagaaactgttggcgctg
gacatgggcgcgttgatcgccggtgccaaattccgcggtgaattcgaagagcgtcttaag
gcggtgctgaccgaagtcaccgaggcggcgggggagatcatcctgttcattgacgagatg
cacacgcttgtcggcgcgggcaaggcggatggcgcgatggacgcggccaacctcatcaaa
cctgcccttgcgcgcggtgaactgcattgtgtcggcgcaaccacgctggatgaataccgc
aaatacgtcgagaaagacgcggcactggcccgtcggttccagcctgtgatggttcaggag
ccaacggtcgaggataccgtttcgatcctgcgcggcatcaaggagaaatacgaactgcac
cacggtgtgcggatttcggattcgtctttggttgccgctgcgacgctgagccatcggtat
atcacggaccggtttttgccggataaggcgattgacctgatggatgaggcggcgtcgcgg
ttgcgcatggaagtggacagcaagcccgaagagctggatgcgatcgaccgtcagatcctg
cagatgcagatcgaggccgaagcgcttcggcttgaggatgacgcggcgagcaaggaccgt
cttgaaacgctcgaaaaggagttggccgaattgcaggagcgcagtgatgcgatgaccgcg
aaatggcaggcagagcgggacaagatggcgggtgcgcgcgacctcaaggagcagcttgat
cacgcccgcgcggagctggaaatcgccaagcgcgaggggaacctcggccgggcgggcgaa
ttgtcctatggtgtgatcccacaactggaaaagcaactggaggctgccgaggggcgggac
gacggcgacgtgatggtcgaagaggccgtgcgccctgagcagatcgccagcgtggtggag
cgttggaccggtatcccggcgggcaagatgctggaaggcgaacgcgataaactgctgcgc
atggaagatcagttgcatggccgcgtgatcgggcagaattccgcggtgcgggcgatttcc
aacgcggtgcggcgtgcccgcgcgggtctgaacgatgagaaccggcctttgggttcgttc
ctgttcctcgggccaaccggtgttggtaaaaccgaattgaccaaggcggtcgcggaattc
ctgtttgacgatgacaatgcgatggtgcgcatcgacatgtcggagttcatggaaaaacac
gcggttgcccgactgatcggggcgcctcccggatatgtcggctatgatgagggcggtgtg
ctgaccgaagctgtgcggcgcagaccctatcaggtggttctgttcgatgaggttgaaaag
gcccatccggatgtcttcaacgtgctgttgcaggtgctggacgacggggtcttgaccgac
ggtcagggtcgcacggtggatttcaagcaaaccttgatcgtgctgacgtcaaaccttggg
gcgcaggcgctcagccagctgcccgacggggcggatgcctctgcggccaagcgcgatgtg
atggatgccgtgcgcgcccatttccggcctgagttcctgaaccgtctggacgagacgatc
atctttgatcgccttggtcgggccgacatggacggaatcgtggaaattcagatggcgcgt
ctgctcaagcggctggccgggcgcaagatcgcgctggaactggatgacgcggcgcgcatg
tggcttgcggatgaagggtatgaccccgtgttcggcgcaaggccgttgaaacgtgtgata
cagcgcgccttgcaggacccgcttgccgagatgattctggcaggggacgtcaaggacggt
gatgtcattcaggtcagtgtcggcagcgaagggctgctgatcggagaccgcgtcgcggcc
accaacaggcccaagccggatgaagcggtcgtacactga
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