Roseobacter denitrificans: RD1_0772
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Entry
RD1_0772 CDS
T00376
Symbol
groL
Name
(GenBank) chaperonin GroEL protein, putative
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rde
Roseobacter denitrificans
Pathway
rde03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RD1_0772 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rde03019
]
RD1_0772 (groL)
03110 Chaperones and folding catalysts [BR:
rde03110
]
RD1_0772 (groL)
03029 Mitochondrial biogenesis [BR:
rde03029
]
RD1_0772 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rde04147
]
RD1_0772 (groL)
Enzymes [BR:
rde01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RD1_0772 (groL)
Messenger RNA biogenesis [BR:
rde03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RD1_0772 (groL)
Chaperones and folding catalysts [BR:
rde03110
]
Heat shock proteins
HSP60 / Chaperonin
RD1_0772 (groL)
Mitochondrial biogenesis [BR:
rde03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RD1_0772 (groL)
Exosome [BR:
rde04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RD1_0772 (groL)
Exosomal proteins of other body fluids (saliva and urine)
RD1_0772 (groL)
Exosomal proteins of breast cancer cells
RD1_0772 (groL)
Exosomal proteins of colorectal cancer cells
RD1_0772 (groL)
Exosomal proteins of bladder cancer cells
RD1_0772 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Lar_N
Motif
Other DBs
NCBI-ProteinID:
ABG30453
RoseoBase:
RD1_0772
UniProt:
Q16C40
LinkDB
All DBs
Position
complement(747428..749059)
Genome browser
AA seq
543 aa
AA seq
DB search
MSAKDVKFDTAARSRMLRGVNTLADAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEI
ELEDKFENMGAQMVKEVASRTNDQAGDGTTTSTVLAQAIVNEGMKAVAAGMNPMDLKRGI
DLATSKVVEAIKAAARDVKDSDEVAQVGTISANGEAEIGRQIADAMQKVGNDGVITVEEN
KGLETETEVVEGMQFDRGYLSPYFVTNPDKMTAELEDPFILIHEKKLSSLQPLVPLLESI
IQAGKPLLVIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQV
ISEDLGMKLESVTIDMLGTAKKVAITKDETTVVNGAGEKAEIDARVSQIRTQIEETTSDY
DREKLQERVAKLAGGVAVIRVGGMTEVEVKERKDRVDDALNATRAAVQEGIVVGGGVALV
QGAKALDGLQGANPDQNAGIAIVRRALEAPLRQIAENAGVDGSVVAGKIRESDDATFGFN
AQTEEYGDLFSFGVIDPAKVVRTALEDASSVAGLLITTEAMVAVKPAGKGAASPAMPDMG
GMM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaaaggacgtcaaattcgataccgccgcccgctcccggatgctgcgcggcgtg
aacactttggccgatgcggtgaaagtgacgctcggccccaaaggccgcaatgtggtcatc
gacaagagcttcggcgcaccccgcatcaccaaggacggcgtgaccgtcgccaaggagatc
gagcttgaggacaagttcgaaaacatgggcgcgcaaatggtcaaggaagtggccagccgc
accaacgatcaggccggtgacggcaccacgacgtcgaccgttctggcgcaggccattgtc
aacgaaggcatgaaggccgtggccgcgggcatgaacccgatggacctcaagcgcggcatc
gatctggccacatcgaaggtcgtcgaagccatcaaggctgctgcccgtgacgtcaaagac
agcgatgaagttgcgcaagtcggcaccatctcggccaatggcgaagcggagatcgggcgt
cagatcgccgacgccatgcagaaagtgggcaatgacggcgtgatcaccgtcgaagaaaac
aagggccttgagaccgagaccgaggtcgtcgaaggcatgcagttcgaccgcggctacctg
tcgccttacttcgtgaccaaccccgacaagatgacagcagagctcgaggatccgttcatc
ctgatccacgagaagaaactgtcttcgctccagccgcttgtgccactgcttgagtccatc
attcaggcaggcaagccgcttctggtcattgccgaggacgtggaaggcgaagcgttggcg
acgctggtagtcaacaagctgcgcggcggcctgaagatcgcagccgtgaaagcaccgggc
ttcggtgatcgtcgcaaagccatgctgcaggacatcgcgatcctgacaggcggccaggtg
atctccgaagacctcggcatgaagctagagagtgttaccatcgacatgctcgggaccgcg
aagaaagtcgcgataaccaaggatgaaaccactgttgtaaatggtgccggtgagaaggcc
gagatcgacgcgcgtgtcagccaaatccgcacgcagatcgaagagaccacctccgactac
gaccgcgagaagctgcaggagcgtgtggccaaactcgcaggaggcgtcgccgtgatccgt
gtcggcggtatgactgaggtcgaggtgaaggaacgcaaggatcgtgtcgacgacgcgctc
aacgcaacccgcgccgctgtgcaggaaggcattgtcgtcggtggtggtgtcgccttggtt
caaggtgccaaggcactcgatggcttgcaaggcgcaaaccccgaccagaacgcaggcatc
gccatcgtgcgccgcgcgctggaagcaccgttgcgccagattgccgagaacgcgggcgtc
gatggttccgtggttgctggcaagatccgggaaagcgatgatgccaccttcggcttcaac
gcgcagaccgaagagtatggcgatctgttttccttcggtgtgatcgatccggcaaaagtt
gtgcgcacggcacttgaagacgcgtcatccgttgcgggcctgctcatcaccaccgaggcg
atggtagcggtcaaacctgccgggaaaggcgctgcatcccccgccatgcctgacatgggc
ggcatgatgtag
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