Roseobacter denitrificans: RD1_0793
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Entry
RD1_0793 CDS
T00376
Symbol
cydA
Name
(GenBank) cytochrome oxidase subunit II, putative
KO
K00425
cytochrome bd ubiquinol oxidase subunit I [EC:
7.1.1.7
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00190
Oxidative phosphorylation
rde01100
Metabolic pathways
rde02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
RD1_0793 (cydA)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RD1_0793 (cydA)
Enzymes [BR:
rde01000
]
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.7 quinol oxidase (electrogenic, proton-motive force generating)
RD1_0793 (cydA)
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Gene cluster
GFIT
Motif
Pfam:
Cyt_bd_oxida_I
Motif
Other DBs
NCBI-ProteinID:
ABG30471
RoseoBase:
RD1_0793
UniProt:
Q16C22
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All DBs
Position
765086..766498
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AA seq
470 aa
AA seq
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MLDVFSAEMLARIQFAFTVSFHIIFPAFSIGLASYLAVLKALWMRTRDETYLTLFNYWKK
IFAVAFGMGVVSGIVMSYQFGTNWSVFSDLAGPVVGPLMAYEVLSAFFLEAGFLGIMLFG
RERVGEKLHMFATAMVAFGTLMSATWILSVNSWMQTPAGFSINEVGQFVPEDWWQIVFNP
SFPYRLAHMVLAAFLTTALVVGAVGAVHLLRDKTDQHARRMFSMAMWMAFIVTPIQIFAG
HEHGLNTLELQPVKIMAMEGHYESHPEGWAPLYLFGIPNDAEQRLDYTLSIPGLGNLIFE
KPLDKPVMGLDTVPDEDQPPVGIVFWSFRVMVGLGFVMLGLGVWSAWSRWRGTLFDAPWL
LRASILMGPTGFVAVLAGWITTEVGRQPYTVYGFLRTSDSLAPVDAPAVATSLVAFIIVY
FAVFGAGTVYILRMMNKPPATPKLGLRDGPIRTAGITPAPQVDPDFIPGE
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcttgacgtctttagcgcagagatgctcgcacgtatccaattcgcgtttacggtgtcg
ttccatatcatcttccccgccttttcgatcggtctggccagctacctcgctgtgctgaaa
gcattgtggatgcggacacgggacgagacgtatctgacgctcttcaactactggaaaaag
atcttcgccgtggcttttggcatgggcgtcgtgtcgggcatcgtgatgtcgtatcagttt
ggcaccaactggtcggtgttctcggatttggccggacccgttgttggtccactgatggct
tatgaagttctgtccgccttctttcttgaagcagggttcctcgggatcatgctctttggg
cgcgaacgggtgggcgagaaactgcatatgtttgccacggccatggtggcttttggcacg
ctgatgtcagcgacttggatcttgtcggtgaacagctggatgcagacgcctgcaggattt
tcgatcaacgaggtcggtcaattcgtgccggaagactggtggcagatcgttttcaacccg
tctttcccctatcgcctggcccacatggtccttgcggccttcctgaccactgcgcttgtt
gtcggcgctgtcggagccgtgcatctgctccgcgataagaccgatcagcacgcgcggcgc
atgttctccatggcgatgtggatggccttcattgttacgccgatccagatctttgctggc
catgagcacgggctcaatacgcttgagcttcaaccggtcaagatcatggcgatggagggc
cactacgaaagccaccccgaaggttgggcaccgctctacctgtttggcattccaaatgat
gcggaacaacgccttgactacacgcttagcattcccggtctcggcaacctcatctttgaa
aaaccgcttgataagcctgtgatggggctcgacacggtccccgacgaagaccagccgccc
gtgggcattgtattctggtctttccgtgtgatggtcgggcttgggttcgtgatgctgggt
cttggggtttggtcggcatggtcgcgctggcgtggcacgctgtttgacgcaccctggtta
cttcgtgccagcattctcatggggccaaccggatttgtggccgttcttgcagggtggatc
accacggaggtggggcgtcagccctatacggtctacggcttcttgcggacctcagacagc
ctcgcgcccgtcgatgcgcccgcagtcgctacatcgcttgtggcctttatcatcgtgtat
tttgccgtctttggcgcgggcaccgtctacatcctgcggatgatgaacaagccgcccgcg
acgccaaaacttggcctgcgcgatggaccgatccgcactgcagggatcaccccggcccca
caagtcgaccccgactttatccccggcgaataa
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