Roseobacter denitrificans: RD1_0820
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Entry
RD1_0820 CDS
T00376
Name
(GenBank) transcriptional regulator, LysR family, putative
KO
K21645
LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rde03000
]
RD1_0820
Transcription factors [BR:
rde03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RD1_0820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
ABG30497
RoseoBase:
RD1_0820
UniProt:
Q16BZ6
LinkDB
All DBs
Position
802412..803389
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AA seq
325 aa
AA seq
DB search
MRLEWIDDILAVLDTGSLARAAQKRLVTQSAFTRRVRLIEESIGAELFDRRRRPVMLLAG
VEALAPELRDLSTRLRQVRQKLHAANSQTGSALSFACQHAITTTVSPYIVRALTARGDAP
VRVRSCNQEECLVLLLSGEVDFVLTYTVPETPTPFLEGAFESLKLGDDVLIPVCAPGLRD
DISSDRLPVISYPSDVFLGQVFDRHIVPRLDNEVQVVTKTETALTLAAYEFAVGGIGVAW
LPQSMVVTALAQGSLISLDRDLPVQPLHIKAFRLCDDGGLQSDSAWRNTLSQIALPDHLQ
SHAPRGADGYPFAGGSYPSCPSAQS
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctggaatggatcgacgacatcctcgcggtgcttgacaccgggtcgttggcgcgc
gcggctcaaaagcgactggtcacgcaatccgctttcacaaggcgtgtgcgattgattgag
gagagcatcggcgcggaattgtttgaccggcggcgcaggcccgtcatgcttttggccggt
gttgaagcgcttgcaccggaactgcgcgacctgagcacgcggctgcgtcaggtcaggcag
aaacttcatgctgcaaacagccagacgggcagcgcgctgagctttgcgtgtcagcatgcg
atcacaacgaccgtgtcgccctacatcgtgcgcgcccttaccgcacgaggcgatgcgccg
gtcagagtgcggtcgtgcaatcaggaagagtgccttgtccttctgctttctggtgaggtt
gattttgttctgacatatacggtgcctgagacgccaaccccattcttggaaggtgcgttt
gaatcgctgaaactcggagacgatgttcttattcctgtatgcgcccccgggctgcgtgac
gatatctcctcagaccggctgccggtcataagctatccgtcggatgtgtttctggggcag
gtttttgaccgacatatcgtgccgcgtctggacaatgaggtacaagtcgtaaccaagacc
gaaacagcacttacgcttgcggcctatgaattcgccgtcggcggcatcggcgtggcgtgg
ttgccgcagtcaatggttgttacggctctggcacagggatcgttgatctcgctggatcgg
gacctgccggtgcaaccgctccatatcaaggcgtttcgactgtgcgatgacggtgggttg
caatcagactcggcatggcggaacaccctgtcccagattgccttgcccgaccatctgcag
tcgcacgccccgcggggcgcggacggatacccgttcgccgggggctcttatccgtcttgt
ccttccgctcaatcctga
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