Roseobacter denitrificans: RD1_0834
Help
Entry
RD1_0834 CDS
T00376
Name
(GenBank) transcriptional regulator, putative
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rde03000
]
RD1_0834
Transcription factors [BR:
rde03000
]
Prokaryotic type
Helix-turn-helix
GntR family
RD1_0834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_Crp_2
HTH_36
Fe_dep_repress
HVO_A0261_N
MarR
DUF6436
Motif
Other DBs
NCBI-ProteinID:
ABG30508
RoseoBase:
RD1_0834
UniProt:
Q16BY5
LinkDB
All DBs
Position
813597..815060
Genome browser
AA seq
487 aa
AA seq
DB search
MAKPRIAAEVFFLDRASKRPLQTQIREAVVASILSKRAMPGSLMPSSRKLAHHLGVARMT
VTLAFQELVDQGYLEARSRSGYSVADTDAIPRLPVGDATAHIENSTLWQKVLSENLRTRR
RVIKPKDWRNMPYPFVFGEMDGKIFRHTAWRECVRQAIGTRDFDLMASNEATDDPLLVDY
ILSRMLPRRGITAKKEQVLITVGAQNAIWLAIELLTRAPLKAVCEDPCYPDTRQALSWCG
ADVTTVEVDQEGLPPDNIPMGVQAVFVTPSHHAPTGATMPLARRERLLELAQARDFIIVE
DDYEFEMSFIEPPSPALKAIDKNQRVLYAGSFSKALFPGLRLGYLVGPEQVIAEARELRS
MMLRHPPGHLQRTAAYFLAQGYYDLLIRDMRREFAKRRKAVVEALARTDLEVAGSAQFGG
TSLWVKAPDGTDTQTLAQDLLADGVVIEPGAPFFQGDNQPSEYFRLGYSSIPLEKIAKGV
QLIAQRV
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaccgaggatcgcagctgaggttttctttttggaccgcgcttcaaaaaggcct
ctgcagacccagataagagaggccgtcgtcgcctcgatcctgtcgaaacgggcaatgccg
gggtcattgatgccgtcatcgcgcaaacttgcacatcaccttggcgttgcgcgcatgacc
gtcacactggcttttcaggaactggtcgatcagggatatctggaggcccgcagccgcagc
gggtattcggtcgccgataccgatgcgataccgcgtctgccggttggtgatgcaacggcg
catatcgaaaacagtacactttggcagaaagtcctgtctgaaaacctgcgaacgcgccgc
cgggtgatcaagccgaaggattggcggaacatgccttacccttttgtcttcggagaaatg
gatggcaagattttcagacatacggcgtggcgcgaatgcgtcaggcaggccataggaacg
cgcgattttgatctgatggccagcaatgaggcgacggacgaccctttgctggtcgactac
atcctgtccaggatgctgccccggcggggaataaccgcaaaaaaagagcaggttctgatc
accgttggcgctcagaatgccatctggctggcgatagaactgttgacccgtgcccccctg
aaagcggtttgcgaagacccctgttatccggacacacggcaggctctgagttggtgcgga
gccgacgttaccaccgtcgaagtggatcaggagggcctgccaccggacaatataccgatg
ggcgtccaagcggtctttgtgacacccagtcaccatgcgcccacaggtgcaaccatgccc
ttggcgcggcgtgaacggctgcttgaattggctcaagcccgcgatttcataatcgtggag
gatgattacgagttcgagatgagctttatcgaaccgcccagccctgcgctcaaagccata
gataagaaccagcgcgttctttatgcgggcagtttttccaaagccctgtttccgggtctt
cggttggggtatcttgtggggcctgaacaggtgatcgccgaggcgcgcgagctgcgctcg
atgatgctgcggcatccgcccggacatcttcaacgcacagccgcctacttccttgcacaa
ggctactacgacttgctgatccgcgacatgcgacgggagtttgccaaacgccgcaaagcg
gttgtcgaagccctggccaggacagacctcgaagtggcgggctccgcgcagtttggcggg
acaagcctctgggtcaaagcgcctgacggcaccgatacccaaacgcttgctcaagatttg
ctggcagacggtgttgtgatagagcccggcgcgccgttttttcagggtgacaaccaaccg
tccgagtatttcagacttggctattcctcgattccgcttgagaaaatcgcgaaaggtgtt
cagttgattgcgcagcgggtataa
DBGET
integrated database retrieval system
