Roseobacter denitrificans: RD1_0846
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Entry
RD1_0846 CDS
T00376
Name
(GenBank) periplasmic solute-binding protein, putative
KO
K11688
TRAP-type transport system periplasmic protein
Organism
rde
Roseobacter denitrificans
Pathway
rde02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RD1_0846
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_0846
Transporters [BR:
rde02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RD1_0846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Endonuc-MspI
Motif
Other DBs
NCBI-ProteinID:
ABG30519
RoseoBase:
RD1_0846
UniProt:
Q16BX4
LinkDB
All DBs
Position
825123..826145
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AA seq
340 aa
AA seq
DB search
MNTKSITRRAAIAAVSGVIALTSYAAAAAADTTRLRMHTFYGTEIDPIIKAFRDRVRDES
DGSLRINVFHGGELVASDQLLSAVQSGSIDIAHGHGGYWSGQVDIGNIEAGLPGGWTSLE
EANAFFASEPVASILNEAYSEAGVVFLGKGYGHDYDLLTKEPIASLEDLKSLRIRATSNV
AKVLESLEIPTVFLPAGELYIGMSTGVIDGAIYGGPIEYEQLKLNETAQYYTRLNMLMPG
WTETFLANEDKWASLSDEHKAILETALAQFAQDITDWLAEGNQSVVDKGDVFEFFVLPES
DSKQLTVAAQQVWQEEAARSERNAKLIELLIENAKAQGRL
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaaaatcaattacccggcgcgcggcaattgctgcggtgtccggtgtcatcgcg
ctgacgtcttatgctgcggctgccgctgcggataccacacgtctgcgtatgcacaccttt
tacggtactgaaatcgatcccatcatcaaggcattccgtgaccgcgtccgcgacgagtcc
gacggcagcctgcgcatcaacgtgttccatggtggtgaattggtcgccagtgaccagttg
ctgagcgctgtgcaaagcggctcgattgacatcgcccatggccatggcggctactggtcg
ggtcaggtggacatcggcaatatcgaagcgggtctgcccggtggctggaccagccttgaa
gaggccaacgcgttcttcgcaagcgagcctgtcgcgtccatcctgaacgaagcatatagt
gaagcaggggtcgtgttcctcggcaaaggctatggtcatgattacgacttgctgacaaaa
gagccgatcgcatcgctcgaagacctcaaatccctgcgcatccgtgcgacgtcgaacgtt
gccaaagtgcttgagagcctcgaaattccgactgtgttcctgcccgccggtgaactttac
atcggcatgtccacaggtgttatcgacggcgcgatctatggtgggcctatcgagtatgag
caactcaaactcaacgaaaccgctcagtattacacccggctgaacatgttgatgcccggt
tggacagagaccttcctcgccaatgaggacaaatgggcgtcgctgtccgatgagcacaag
gcgatccttgaaactgcgctcgcgcagttcgctcaggacatcacggattggcttgccgaa
ggcaaccagtcggttgtcgacaagggcgatgtctttgaattcttcgtactgccggaaagc
gattcaaagcagttgaccgttgccgcacagcaggtctggcaggaagaggccgcgcgctcc
gagcgtaacgcaaagctgatcgaacttctgatcgagaatgccaaggcccaagggcgtctc
tga
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