Roseobacter denitrificans: RD1_0864
Help
Entry
RD1_0864 CDS
T00376
Name
(GenBank) ribose ABC transporter, periplasmic binding component, putative
KO
K10439
ribose transport system substrate-binding protein
Organism
rde
Roseobacter denitrificans
Pathway
rde02010
ABC transporters
rde02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RD1_0864
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
RD1_0864
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_0864
Transporters [BR:
rde02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
RD1_0864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
ABG30533
RoseoBase:
RD1_0864
UniProt:
Q16BW0
LinkDB
All DBs
Position
838755..839891
Genome browser
AA seq
378 aa
AA seq
DB search
MTMNHCKKMLGAVSLAGGLMLSTAAFAGPEFVSGPGHDPVCFTPWSDDIKFMQWEPREGP
HKVAVVNGFVGNTWRIQMIQTAKAFAEQPDIAAQLEDFKVVSTGTDVAAQLGAIEDFINQ
GYDAIVTIAVSPEGFDRVIRLADRNDVVVVPFDNVLDTDKVMQVNQDQLEMGRMYARWLI
EQLGDQKSGKILEVRGLQGNSVDRDRHIGFREIMEPSGDWDIVEVVGNWDDGTAQKVTAD
AIAVHKEFDAVVVQGGTTGAVRAMLDAGHPLVPIAGESENGFRKLLAEYGPQGLKGKSIG
QSPGMVSIAMKAALAALDGKVMPQLVSVPIPFANYDELEAGKNYWPDLTDNFFTVNEFPP
CGVNITAREIMAKTADND
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgaaccactgcaaaaagatgcttggcgcggtgagccttgccggcggtctgatg
ctgtcaactgcggccttcgcggggccggaattcgtatctggcccgggccatgatccggtg
tgtttcacaccttggagcgatgacatcaaattcatgcagtgggaaccgcgcgaagggccg
cataaagttgccgtggtcaacggctttgtcgggaacacatggcgcattcagatgatccag
accgcgaaagcctttgccgagcagcctgacatcgcggcgcagttggaagacttcaaggtt
gtgtctaccggcaccgatgttgcagcgcagcttggcgcgatcgaagactttatcaaccag
ggctatgacgccatcgtaaccatcgctgtgtccccggaagggttcgatcgggtgatccgt
ctggcggatcgtaacgacgttgtcgtcgtgccctttgacaatgtgctcgacacggacaag
gtgatgcaggtcaatcaggaccagcttgaaatggggcgcatgtacgcgcgctggctcata
gaacaactgggcgatcagaaatccggcaagatccttgaggtgcgcggtctgcaaggcaac
tccgttgatcgggaccgccacatcggtttccgtgagatcatggaaccatccggggattgg
gacatcgttgaagttgtcggcaattgggatgatggcaccgcgcaaaaggtgacggcagac
gccatcgcggtgcacaaggaatttgacgcggttgtggttcagggcggtacgaccggggcc
gtgcgtgcgatgctggatgcgggtcatccgctggtgccaattgccggggaaagcgaaaac
ggattcagaaagctgttggcggaatacggcccacaggggctgaaggggaaatccatcggc
cagtcccccggtatggtgtcaatcgccatgaaggcagcgcttgcagcactggatggcaaa
gtgatgccgcaacttgtctctgtacccattcctttcgcgaattacgacgaactggaggcg
ggcaaaaactactggccggacctcaccgacaacttctttaccgtcaatgagtttccaccc
tgcggcgtgaacatcaccgcgcgggaaatcatggcaaagactgccgacaacgactga
DBGET
integrated database retrieval system
