Roseobacter denitrificans: RD1_0867
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Entry
RD1_0867 CDS
T00376
Symbol
rbsC
Name
(GenBank) ribose ABC transporter, permease protein
KO
K10440
ribose transport system permease protein
Organism
rde
Roseobacter denitrificans
Pathway
rde02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RD1_0867 (rbsC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_0867 (rbsC)
Transporters [BR:
rde02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
RD1_0867 (rbsC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
ABG30536
RoseoBase:
RD1_0867
UniProt:
Q16BV7
LinkDB
All DBs
Position
842594..843574
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AA seq
326 aa
AA seq
DB search
MAITDNTSQEKSRWLSPENKPIAIASGFIVVILAIGTSYTLVTQGTATLLSPTYLLQQLQ
VGSFLGIVAAGMMLVILLGHIDLSVPWTVAAAAMMATAVGGPAALPVGLSVGLAVGLVNG
LGVAYLRIPSMIFTLGVNAVMRGLMVAYTGGFAPQTAATPLMQYLAVGKFLGIPVALFVW
AVVSVGIVFILRKTATGRYIFAIGNRESAAYLAGAPTRGVIVIAFALCGMMSGLAGTLLA
GYSTKAYQGMGDAFLLPAIAAVVIGGTHILGGKGRYLGTLVGVILIVLLNSVLSIMQMPE
AGRQVIYGAVIILMLLFYDRGAQERQ
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcactgacaacacttcacaagaaaagagccgctggctctcgcctgaaaacaaa
ccgattgcgattgcttcgggcttcattgttgtgatcctcgccatcgggacaagctacacg
cttgtaacacaaggcaccgcgacgctgttgtcgccgacctatctactgcaacagttgcag
gtgggttcgtttctggggatcgtggcggctggtatgatgctggtcattctgctggggcac
attgacctctccgtcccttggacggtggcggccgctgccatgatggccacggcggtgggc
gggccggccgccttgcccgtggggttaagcgtcgggctggccgtcgggctggtcaatggc
ctcggggttgcctacctgcgcattccatcgatgatattcacccttggcgtcaacgcggtg
atgcggggcctgatggtggcctataccggtggttttgccccccagacagcagcgacaccg
cttatgcagtatcttgccgtgggcaaattccttggcataccggttgcgttgttcgtctgg
gcggtggtgtctgtgggtatcgtctttatcctgcgcaagacagcgaccgggcgttacatc
tttgccatcggcaaccgtgaatccgcggcctatctggcgggcgcaccgacgcgcggtgtg
atcgtgatcgcgtttgctctgtgcggtatgatgtcgggcctcgcaggcaccttgctcgcg
ggatattccaccaaggcgtatcaggggatgggggatgcgttcttgctgcccgccatcgcg
gcggtcgtgatcggtggaacgcatattctggggggcaaggggcgctatctgggcacgctt
gttggtgtcatcctgatcgtgctgctcaattccgttctgtcgatcatgcagatgcccgaa
gcggggcggcaggtgatctacggcgcggtcattatcctgatgcttctgttttacgaccgc
ggcgcgcaggaaagacaataa
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