Roseobacter denitrificans: RD1_0869
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Entry
RD1_0869 CDS
T00376
Name
(GenBank) type I secretion target repeat protein
Organism
rde
Roseobacter denitrificans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HemolysinCabind
Motif
Other DBs
NCBI-ProteinID:
ABG30538
RoseoBase:
RD1_0869
UniProt:
Q16BV5
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All DBs
Position
complement(844513..846414)
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AA seq
633 aa
AA seq
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MLNGGAGTDTLNTAKFGGNYTVNLATGETNYRGRPETPVESFINFENIVSGRGDDTITGT
DVDNTIDSGPGSDTIDAGGGDDTIFARSGNDTILASPGGDLIFAGEGNDTITTSGPDAVH
AEAGNDTVILGDSTELFADGGSGVDRMDASVSTASFRINLGTFATGVEGMRFVNFENLMT
GAGDDVIIGTDDTNLIDSGAGDDRVFGRGGDDGLIGGDGDDILFGEDGNDILRGGSGNDR
LYGGDGHDEMYGQTGDDLMIGKAGGDSLVGGLGSDILIGGAGRDFLTGGDDDDELYGGVD
SDNLDAGEGNDLLYGGDGDDFLAAYGGDDVLKGGNGDDTLAGGLGNDRIFGGTGADEIFG
GAGDDVIVGREGNDTVDGGAGNDIILGNFKQDRLSGGAGDDAIFGGDGRDYLYGNEGNDR
LYGGQNLDIIYGGEGDDFIFGNDDNDLLYGGDGKDTLYGQQGIDSLRGEEGDDILFGGDG
DDRLSGNSGADMLWGGAGNDILYGGSGSDILRGGLGDDTFEFNEVSDSTRLAADVIKDIE
GVGSAGGDVIDLSVIDANVTGLNYVNDSFTFLGVKTREEGLAFGAGALWLEDFGGQTRVF
GLDDNDGAVDFALWIADGDRFDVDDYLASDFIL
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatggcggtgctggtaccgacacccttaacaccgccaaatttggcgggaactac
acggtaaaccttgcgacgggagagacgaattacaggggtcgacctgagacacccgtagaa
tccttcatcaacttcgagaacatcgtcagcggaaggggggatgacacgatcaccggcacc
gacgtggacaataccattgattccgggccgggcagtgacacaatcgacgcaggcggcggt
gatgacaccatctttgcgcgctctggcaatgacacgatccttgcaagccccggtggtgat
ctcattttcgcgggggaaggcaatgacacgatcacgacatccggccctgatgcggtccat
gccgaggctggcaacgacacggtcattctcggcgatagcacggagcttttcgccgacggc
ggttcgggagtggataggatggacgcctccgtcagcaccgcaagtttccgcatcaacctc
gggaccttcgcgactggcgtagaaggaatgaggttcgtgaatttcgaaaaccttatgacc
ggcgccggggatgatgtgatcataggaacggatgacacaaatctgattgacagtggtgcc
ggcgacgaccgggttttcgggcgcggtggcgatgatggtcttatcggtggcgacggcgat
gatatcctctttggtgaggacggaaatgacatcctcaggggtggcagtggcaatgatcga
ctctacgggggcgacgggcatgacgaaatgtatggccagaccggcgatgatctgatgatc
ggcaaagctggcggtgacagcttggtcggcgggctgggaagcgacattctcatcggcggc
gcaggccgcgattttctgaccggtggcgacgacgatgatgaactttacggcggggtggat
agcgacaatctcgacgcaggcgagggcaacgatctgctttatggcggggatggcgacgac
tttctcgcagcctatggcggcgacgatgtgctcaagggcgggaacggggacgacaccctc
gctggcgggttgggcaacgaccgcatttttggcggaaccggtgcagatgagattttcgga
ggtgccggggacgacgtcattgtcggcagagagggcaatgacaccgtcgatggcggcgct
ggcaacgatatcatcctggggaacttcaaacaggaccggctgagtggcggcgcgggtgat
gacgcgatatttgggggggatgggcgcgactatctctatggtaacgagggaaacgaccgg
ctctatggcggccagaatttggacatcatctacggaggggaaggtgatgatttcattttc
ggaaatgacgacaacgatctgctctatggcggggatggaaaagatacgctttatggccag
caaggcatagacagtttaagaggcgaagaaggcgacgatatcctgtttggcggggatggg
gacgatagactgtcaggcaatagcggtgccgatatgctctggggtggcgcgggaaatgat
atcctctatggcggatcaggcagcgatatcctgcgcggcggtctgggggatgacacattt
gaattcaatgaagtttccgattccacacgcctggccgcggatgtcataaaggacatcgaa
ggcgtcggctcagccggtggtgacgtcatcgacctctcagttattgatgcgaatgtcacc
gggctgaactatgttaatgacagctttaccttcctcggggtgaagacgcgcgaagaggga
cttgcattcggcgcgggggcgctctggctggaagacttcggcggccagacgcgggtgttc
gggctggacgacaatgatggcgcagttgatttcgcgctttggattgccgatggcgacagg
tttgacgtcgatgactacctcgccagcgacttcatcctctga
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