Roseobacter denitrificans: RD1_0927
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Entry
RD1_0927 CDS
T00376
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00250
Alanine, aspartate and glutamate metabolism
rde00310
Lysine degradation
rde00350
Tyrosine metabolism
rde00650
Butanoate metabolism
rde00760
Nicotinate and nicotinamide metabolism
rde01100
Metabolic pathways
rde01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
RD1_0927 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
RD1_0927 (gabD)
00310 Lysine degradation
RD1_0927 (gabD)
00350 Tyrosine metabolism
RD1_0927 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
RD1_0927 (gabD)
Enzymes [BR:
rde01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
RD1_0927 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
RD1_0927 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
RD1_0927 (gabD)
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GFIT
Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
ABG30595
RoseoBase:
RD1_0927
UniProt:
Q16BP8
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Position
complement(896864..898342)
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AA seq
492 aa
AA seq
DB search
MKDLPATNLKSLLKDPSLLETRAYVDGAWVDGDNGTFDVTNPARGDVIAQVADLSRTQVA
QAIARAEVAQKDWAAQTGKERAGVMRRWFDLMMENADDLATILTAEQGKPHAEAKGEIAY
GASFIEFMGEQAKRVYGETIPGHQRDKRIIVLKQPIGVAASITPWNFPNAMITRKAAPAL
AVGCAFVARPAAETPLSAIAMGVLAERAGIPAGVFNVVPSSSSSEIGKEFCENPGVRKLT
FTGSTEVGRILLRQAADQVMKCSMELGGNAPFIVFDDADLDAAVEGAMMCKFRNNGQTCV
CANRIYVQAGVYDAFAEKLKTAVEGLRVGDGLEDGVTTGPLINTEAVEKVQDHMNDVVSN
GGAVLTGGKPHALGGSFFEPTIVTGVTQDMKVAQEETFGPLAPLFKFEDEDDVIAMANDT
IFGLASYFYAKDLSRVYKVSEALEYGIVGVNTGIISTELGPFGGVKQSGLGREGSHHGIE
DFLEMKYICMSV
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacttgcctgcaaccaatctgaaatcactgctcaaggaccccagcctgctggaa
acgcgcgcctatgtggacggcgcatgggttgacggggacaacggcacttttgatgtgacc
aaccccgcacgcggtgacgtcatcgcgcaggtcgcggatctgagccgcacgcaggtggcg
caggccatcgcgcgcgctgaagtggcgcagaaggactgggcggcccaaaccgggaaagaa
cgcgcaggtgtcatgcgccggtggtttgatctgatgatggaaaacgccgacgatcttgcg
accatcctgaccgcagaacagggcaaaccccacgccgaggccaagggcgaaatcgcctat
ggagcgagctttatcgagtttatgggcgaacaggcaaaacgcgtttacggagagaccatt
cccgggcaccagcgcgacaaacgtatcatcgtgctcaagcagcccatcggcgttgccgcc
tcaatcacaccgtggaatttccccaacgcgatgatcacccgcaaggcggcccctgccctt
gcggtcgggtgtgcctttgtggcccgcccggcggctgagacgccgttgtccgcgatcgca
atgggtgttctggccgagcgtgcgggcatccccgcaggtgtcttcaacgttgtgccttcg
tcgtcgtcttcggagatcggcaaggagttctgcgaaaaccccggtgtgcgcaagctgacg
ttcaccggctcaaccgaagtcggtcgcattcttttgagacaggccgccgatcaggtcatg
aagtgctctatggagctgggcgggaatgccccgtttatcgtgtttgacgacgcagatctt
gatgccgccgttgagggcgcgatgatgtgcaagttccgcaacaacggtcagacctgtgtc
tgtgcaaaccgaatctacgttcaggccggggtctatgacgcctttgccgaaaagctgaaa
accgccgtcgaagggttgcgcgttggcgatggtcttgaggacggcgtgacaaccggcccg
ctgattaacacggaggccgttgaaaaagtgcaggaccacatgaacgacgtggtctcgaac
gggggggctgtgctgacgggcggcaaaccgcatgcgctgggtggctcgttctttgagccg
acgattgtgaccggcgtgacccaggacatgaaagtcgcgcaggaagaaacattcggcccg
ctcgctcctctgttcaaattcgaggatgaggatgatgtgatcgcaatggccaatgatacg
atctttggtcttgcctcgtatttttacgccaaggacctcagccgcgtttacaaagtgtca
gaggcgctggaatacggcatcgttggtgtgaacacagggatcatctcgaccgaactcggg
ccctttggcggggtcaaacaatccggtcttggccgcgaaggatcacaccatggcatcgag
gatttcctcgaaatgaaatacatctgcatgagcgtgtaa
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