Roseobacter denitrificans: RD1_0991
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Entry
RD1_0991 CDS
T00376
Name
(GenBank) WD repeat protein
KO
K08738
cytochrome c
Organism
rde
Roseobacter denitrificans
Pathway
rde00190
Oxidative phosphorylation
rde01100
Metabolic pathways
rde02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
RD1_0991
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RD1_0991
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Cytochrom_C
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
NBCH_WD40
Ge1_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_IP5PC_F
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_VPS8
Cytochrome_CBB3
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-ProteinID:
ABG30657
RoseoBase:
RD1_0991
UniProt:
Q16BI6
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All DBs
Position
complement(956253..957581)
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AA seq
442 aa
AA seq
DB search
MKKQHTLFAARHGLLFGLVTCGLFLSSPTQAQEAFTLNGHGGPVKGISTQTDGTILTASF
DNSVGIWTDGTPQWLEGHEAAVNAVVPVANDQIVSAGDDYSVRLWSPQNGTVRELGRHNA
KVIRLAAAPDGQSVASASWDRTVRIWPIDGAASLLIEGHDNTVSDVAFSPDGTRVYTSSA
DGTIRVWDAQTGAFLKRLVEHGFGINTLLVAPDESWLAYGAVDGGTRLVSLPEGVDIGDF
TADRRPILAMAHSDKTDRIAIGDAQGYIMMIDSSALRITDDFQATPAGPVWALAFSPDGQ
NIHAGGISDVVHSWPVGSLDSATQMTGTTRAFMTDPDQMTNGERQFKRKCSICHTLEPDG
KRRAGPSLYGLFGRAAGAIKDYPYSPTLATSDLVWTEETVDLLFDLGPDHYIPGSKMPMQ
RITGAQDRADLISFLQSATTPE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagcaacacaccctctttgctgcccgccatgggttgctcttcggccttgttacc
tgcggccttttcctgtcatcaccgacgcaagcgcaggaggcttttaccctcaacggccac
ggcgggccggtcaaggggatcagcacgcagaccgatggcacgatcctgaccgcaagtttc
gacaactcggtcggcatctggacagacggcacaccgcagtggctggaggggcatgaagcg
gcggtgaatgcggtcgtccccgtggccaatgatcagatcgtatccgcaggggatgactat
tcagtccggctctggtcgccgcaaaacggcacggtgcgcgaacttggcagacataatgcc
aaggtcatccgccttgccgccgccccggacgggcaaagcgtcgcctccgccagttgggac
cggaccgtgcgtatctggccgatcgacggcgcagcctcgctgctgatcgaagggcatgac
aacacggtcagcgatgtggccttttcccccgatggaacgcgcgtctataccagctcagcc
gatggcacgatccgggtctgggacgcgcaaaccggggccttcctgaaacgtctggtggaa
catggctttggcatcaacaccctgctggtcgcgcctgatgaaagctggctggcctatggt
gccgtcgacgggggaacgcggctggtctccctgcccgagggcgttgacatcggcgacttc
accgctgatcgccgccctattctggccatggcccatagcgacaagacggaccggatcgcg
attggcgacgcgcagggctacatcatgatgatcgacagcagcgccctgcgcatcaccgat
gattttcaggccacccccgccgggccggtctgggcgctggcattttcaccggacggccag
aacatccatgccggtgggatttctgacgtggtacacagttggcccgtaggcagccttgac
agtgccacgcaaatgaccggcaccacccgcgccttcatgaccgacccagatcagatgacc
aacggcgagcgccagttcaaacgcaaatgctccatctgtcacacgctggaaccggatggg
aaacggcgcgcagggccctccctttatgggctgtttggccgcgccgcgggcgcgatcaag
gattatccctactcccccacactggccacatcagacctggtctggaccgaagaaaccgtt
gatctgctgtttgaccttgggccggatcactacatccccggctccaagatgccgatgcaa
cggatcacgggcgcgcaggaccgcgccgacctgatcagctttctgcaatcggccacaacg
cccgaatag
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