Roseobacter denitrificans: RD1_1012
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Entry
RD1_1012 CDS
T00376
Symbol
pheS
Name
(GenBank) phenylalanyl-tRNA synthetase, alpha subunit
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RD1_1012 (pheS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rde01007
]
RD1_1012 (pheS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rde03016
]
RD1_1012 (pheS)
Enzymes [BR:
rde01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
RD1_1012 (pheS)
Amino acid related enzymes [BR:
rde01007
]
Aminoacyl-tRNA synthetase
Class II (U)
RD1_1012 (pheS)
Transfer RNA biogenesis [BR:
rde03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RD1_1012 (pheS)
Prokaryotic type
RD1_1012 (pheS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
Phe_tRNA-synt_N
Motif
Other DBs
NCBI-ProteinID:
ABG30677
RoseoBase:
RD1_1012
UniProt:
Q16BG6
LinkDB
All DBs
Position
973220..974293
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AA seq
357 aa
AA seq
DB search
MDDLKQKYLSQIAAAQDEAGLEAIRLAAVGKKGEVALKMRELGKMTPEERQVAGPALNAL
KDEINSALAAKKAGLADAALDARLRDEWLDVTLPARGRPRGTIHPVSQVTEEVTAIFGEM
GFSVAEGPRIDTDWYNFDALNIPGHHPARAEMDTFYMTRAEGDDRPPHVLRTHTSPVQIR
TMEAQGAPLRIICPGGVYRADYDQTHTPMFHQVEGLAIDKDISMANLKWVLEEFFAAFFE
IDGIKTRFRASHFPFTEPSAEVDIQCSWIDGQLRIGEGDDWLEVLGSGMVHPKVLAAGGI
DPDQWQGFAFGMGIDRIAMLKYGIPDLRAFFDSDLRWLRHYGFASLDQPTLHGGLSR
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggacgatctcaagcaaaaatacttaagccagatagcggcagcgcaggacgaggcgggg
ctggaagcgatccgcctggcggctgtcggcaagaagggtgaggtcgccctgaaaatgcgc
gagttgggcaagatgaccccggaagaacgacaggtcgctggcccggccctcaatgccctc
aaagatgagatcaattcggcgctggctgccaagaaagcgggcttggcggatgccgcgctg
gatgcgcgtttgcgcgacgagtggctggatgtgaccctgcccgcgcgcggacgtccgcgc
gggacgatccacccggtcagtcaggtcaccgaagaagtcacggccatctttggcgaaatg
gggttttcggtcgccgaagggccgcgcattgataccgattggtataactttgacgcgctc
aacattccgggccaccacccggcgcgggccgagatggacacgttttacatgacgcgcgcc
gaaggcgacgaccgcccgccccatgtgctgcgcacccatacgtcccctgtgcaaatccgc
acgatggaggcgcagggcgcgcccttgcgcatcatctgtcccggtggcgtctaccgcgcg
gattacgaccagacgcatacgcccatgttccatcaggtcgaaggactggcgatcgacaag
gacatctccatggcgaacctgaaatgggtgctggaggagttctttgccgccttctttgaa
atcgacgggatcaagacgcggttccgcgcgtcgcacttccccttcaccgaaccctcggcg
gaggtggatatccagtgttcgtggattgatgggcaattgcgcatcggcgaaggggacgac
tggctcgaagttcttggctccggcatggtacatcccaaggtgctggccgccggcgggatt
gaccccgaccagtggcagggcttcgcctttggcatgggcatcgaccgcatcgccatgctg
aaatacggcatcccggatttgcgcgcgttctttgattccgacctgcggtggctgcggcat
tacgggtttgcctcgctggatcagccgacgctgcatggggggctgagtaggtga
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