Roseobacter denitrificans: RD1_1042
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Entry
RD1_1042 CDS
T00376
Name
(GenBank) ribonuclease T2 family
KO
K01166
ribonuclease T2 [EC:
4.6.1.19
]
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rde03016
]
RD1_1042
Enzymes [BR:
rde01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.19 ribonuclease T2
RD1_1042
Transfer RNA biogenesis [BR:
rde03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
RD1_1042
Prokaryotic type
RD1_1042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_T2
Motif
Other DBs
NCBI-ProteinID:
ABG30705
RoseoBase:
RD1_1042
UniProt:
Q16BD8
LinkDB
All DBs
Position
complement(1005720..1006349)
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AA seq
209 aa
AA seq
DB search
MRWLIASLIAALPLGAQSDTSGTFDYYVLSLSWSPNWCALEGDARGSDQCDARHDHGWIL
HGLWPQYESGFPDYCQTSERAPSRQMTAGMADIMGTSGLAWHQWKKHGTCAGVSAAQYFD
TSREAYARIKRPEILRRLSEPVRIAPQVVEQAFLEANPELRPDQITITCRDGHIQEARVC
LTRALEPRQCGRDVIRDCSAKNALFTPVR
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgcgctggctcattgcctcacttattgccgccctgccccttggcgcccagagcgatacg
agcggcacgtttgactactatgtcctctcgctcagctggtcgccaaactggtgcgcgctt
gaaggggatgcgcgcgggtcagaccaatgtgatgcgcgccatgatcatggctggatactc
catggcctgtggccgcaatacgaaagcggctttcccgactactgtcagacctccgaacgc
gcgccctcccggcagatgaccgctggcatggccgatatcatgggcacctccggtctggcc
tggcaccagtggaaaaagcatggcacctgtgccggggtgagtgccgcgcagtattttgac
acatcgcgcgaggcttacgcgcggataaagcgcccggaaattctgcgccggttgagcgaa
cctgtgcgcatcgcgccgcaggtcgttgaacaagcctttcttgaggcaaaccccgaattg
cgccccgatcagatcacgatcacttgccgcgacggacatatccaagaggcacgggtttgc
ctgacccgcgcgcttgagccgcgccagtgcgggcgcgatgtcatccgggactgtagcgcg
aaaaacgcgctgttcaccccggtccgctag
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