Roseobacter denitrificans: RD1_1052
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Entry
RD1_1052 CDS
T00376
Name
(GenBank) C4-dicarboxylate transport system, substrate-binding protein, putative
KO
K11688
TRAP-type transport system periplasmic protein
Organism
rde
Roseobacter denitrificans
Pathway
rde02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RD1_1052
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_1052
Transporters [BR:
rde02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RD1_1052
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
ABG30714
RoseoBase:
RD1_1052
UniProt:
Q16BC9
Structure
PDB
PDBj
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All DBs
Position
complement(1013751..1014728)
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AA seq
325 aa
AA seq
DB search
MRLFTKIKGLAAVTCVAALASSAAFAQEMTLKLGHLANEQNAWHLAAVKFGEELSTLTDG
RIAVEVFPNESLGKEIDLINGMQLGTVDMTITGESLQNWAPMAALLAVPYAYKSLEHMDE
VASGEIGEQIKQQIIEKAQVRPIAFFARGPRNLTSQRPITSPADLDGMKMRVPNVPLFVD
VWSALGASPTPMAFSEVFTSLQNGVIDGQENPLALIRSANFNEVQGYVNQTEHVRSWIYL
TIAESTWAKLSEDDQNAVMQAAATAQEYERGLLLESLAEDRGYLESKGMTFVEVDGAAFQ
AAAKDAVLANVSEEIRPIVESLFSE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaggctctttacaaaaatcaaaggactggctgcggtgacctgcgttgcagcgctcgcg
tcttcagccgcatttgcgcaggagatgaccctgaaactggggcatctggcaaatgagcaa
aacgcatggcacctcgcagcggtcaaattcggcgaggaactctccacgctgaccgacggt
cgcattgccgtcgaggttttcccgaacgaatccctcggcaaggaaatcgacctgatcaac
ggcatgcaacttggcacggtggacatgacgatcaccggcgaaagcctgcaaaactgggcc
ccgatggcggcgttgctggccgtaccctatgcctacaaatcccttgagcatatggacgaa
gtcgcctctggcgaaatcggtgaacagatcaaacagcagatcatcgaaaaggcccaagtg
cgcccgattgcgttctttgcccgtgggccgcgcaatctgacgtcgcaacgcccgatcaca
tcacctgcagaccttgatggcatgaaaatgcgcgtcccgaacgtgccgcttttcgtggac
gtctggagcgctctgggcgcatcgccaacaccgatggcattctccgaggtctttacctcc
ctgcaaaacggcgtgatcgacggtcaggaaaacccgcttgccctgatccgctcggccaac
ttcaatgaagtccagggctatgtgaaccagaccgaacatgtccggtcctggatttacctg
acaatcgcggaatccacctgggccaaactgtccgaggacgatcagaacgccgtcatgcag
gccgcagcaacagcgcaggaatatgagcgtggtctgctgctggaaagcctcgccgaagat
cgcggctatctcgaaagcaagggcatgaccttcgtcgaggtggatggcgcggcgtttcag
gccgctgccaaggacgcggttcttgccaacgtaagcgaagaaatccgccccatcgtggaa
tcgctgttctctgaataa
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