Roseobacter denitrificans: RD1_1096
Help
Entry
RD1_1096 CDS
T00376
Name
(GenBank) mechanosensitive ion channel protein, putative
KO
K22044
moderate conductance mechanosensitive channel
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_1096
Transporters [BR:
rde02000
]
Other transporters
Pores ion channels [TC:
1
]
RD1_1096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Tetradecapep
Motif
Other DBs
NCBI-ProteinID:
ABG30753
RoseoBase:
RD1_1096
UniProt:
Q16B90
LinkDB
All DBs
Position
1046348..1048726
Genome browser
AA seq
792 aa
AA seq
DB search
MRASLIALFIVFLTAILALPGDSHAQSVGSLFGTAGAAEEDGSADRISDIMEKAAENGVG
VVVIDLEGNVVSTAGQPPPNAEVAPVESSGSALMKAQDSLVKFRATLVQRILGLPDDFNE
VIYILRATSPDGTMWAYFQALYISMALFGVGMLVQRYVFGRYIARSMIVARTLENPQGYS
EKMPWLVFRFFLGVIGILVSMAVAYALGALIFGPLEDPGLQFTVSVINVAYFLSRAVAAL
WRMILSPYMPQYRIPHLNTRDAKRLNYWLVTLGTFDIVRLLFTLWVRELGLNYDVFAFMA
SLLGAAVVVANIVMVLVNRRALSNAIRKGEPRENCSWIIKALSSIWAPAVIAYMLYAWFQ
VTYDLVLGTPPAVPLIAGAYAILLSILVVFGVINFGIERGFARARAIRALNQGDPQHTDD
ADDRSEAEDKTQERMHYAPKTMRTYEELAQRVAGIVAFVAGAYAFFYIWDNNSTQMVESF
ANRLLDVMVILFIGYVVYHAFRIWIDNKIADELGDVSEGELGDEGGASSASRLATLLPLF
RNFILIVLIVTITLIVLMELGVNVGPLFAGAGVVGVAVGFGSQALVRDIFSGGFFLFDDA
FRKGEYLDVGGVKGTVEKISVRSFQLRHHLGALHTIPFGEIQVMTNYSRDWVIMKLKLRV
TYDTDVEKVRKLIKKLGVELLDDPVIGENFIQPLKSQGVVEMQDSAMIIRVKFMTKPGDQ
WLVRKKVYEEIRSLFEREGIHFAHKEVTVRLADSDSKPENLTEKEKQAITAAARAAVDDD
ALEGGAPETDDR
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcctcccttatcgctcttttcattgtctttttgacggccatcctcgccttgccg
ggcgacagtcatgcacaaagcgtcggctcgctttttggcactgccggggccgccgaagaa
gacggcagcgcggatcgcatatctgacatcatggaaaaagccgccgaaaacggcgttggc
gtcgtggtcattgatctggagggcaacgttgtatcgaccgcgggtcagcccccgcccaat
gccgaagtcgcgccggtcgaaagcagcggttccgccttgatgaaggcacaggattcactg
gtgaaattccgcgcgaccctcgttcagcgtatccttgggttgccggatgatttcaacgag
gtgatctatatcctgcgggccaccagcccggatggcaccatgtgggcctattttcaggcg
ctttacatctcaatggcgctttttggggtgggcatgctggtgcagcgatatgtctttgga
cgttatatcgcgcgctccatgatcgtggcccggacgctggaaaatccacagggctattcg
gaaaagatgccttggctggtgttccgctttttccttggcgttattggtattctggtttcc
atggcggtggcctatgccttgggtgcgctgattttcggcccccttgaagatccgggcctg
cagttcacggtcagcgtcatcaatgtggcgtattttttgagccgtgccgtggctgcgctc
tggcggatgatcctgtcgccctatatgccgcaatatcgcatcccgcacctcaatacgcgg
gatgcaaagcgtctgaactattggctggtcacactggggacgttcgatatcgtccggctt
ctgttcaccctctgggtgcgcgagcttgggctgaattacgatgtctttgccttcatggcg
tccctgcttggcgcggctgtggtggtagccaatatcgtgatggtactggtcaatcgccgc
gcactctccaatgcgatccgcaaaggcgagccgcgcgagaattgcagttggatcatcaag
gcgctgtcgtcaatctgggcgcctgcggtgatcgcctatatgctctacgcatggtttcag
gtcacctatgatctggtgctgggcacgccgcctgcggtgccattgattgcgggagcctat
gcgatcctgctgtcgatcctcgtggtctttggcgtaatcaactttggcatcgaacgtggt
tttgcccgcgcccgcgcgatccgggcgctgaaccagggcgaccctcagcacaccgacgac
gcagacgatcgctcggaggcggaggataaaacgcaagagcgcatgcattacgcgcccaaa
acaatgcgcacctacgaggaactggcgcagcgggttgcgggcattgtggcctttgtcgcg
ggcgcatatgcgttcttctacatctgggacaataacagcacgcagatggtcgaaagcttt
gccaatcggctgctggacgtcatggtgatcctgtttattggctatgtggtttatcacgcc
ttccgcatctggatcgacaacaagatcgctgatgaactgggcgatgtgagcgagggcgaa
ttgggtgatgagggcggtgcgtcgtctgcgtcccggctggcgacgctgctgccgctgttt
cgcaactttatcctgatcgtgctgattgtgaccatcacgctgattgttctgatggagctg
ggtgtcaatgtcgggccgctctttgccggtgcgggtgttgtgggggttgccgtgggtttt
ggctcacaggcgttggtgcgcgatatcttttcgggcgggtttttcctgtttgatgacgcg
tttcgcaagggcgaatatctggacgtcgggggtgtgaaaggcacggtcgaaaaaatctct
gtgcgctcattccagttgcgccatcatcttggcgcgctgcacacgatcccctttggtgaa
attcaggtcatgacgaattactcgcgcgattgggtgatcatgaagctcaagctgcgcgtc
acctatgacaccgacgttgagaaagtgcgtaagctgatcaagaagctgggcgttgagttg
ctggatgaccccgtgattggcgagaacttcatccaaccgctgaaatcgcagggtgtggtc
gagatgcaggacagcgcgatgatcatccgcgtcaaattcatgaccaagccgggcgatcaa
tggctggtgcgcaagaaagtctatgaggaaatccggtcgctgttcgaacgcgaaggcata
catttcgcgcataaagaagtcaccgtgcgtcttgcagattccgactccaagccagagaac
ctgaccgaaaaggaaaaacaggccatcaccgccgccgcccgcgccgcggtggacgatgac
gcactggagggcggcgcacccgagacggatgaccgctag
DBGET
integrated database retrieval system
