Roseobacter denitrificans: RD1_1105
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Entry
RD1_1105 CDS
T00376
Symbol
rpe
Name
(GenBank) ribulose-5-phosphate 3-epimerase
KO
K01783
ribulose-phosphate 3-epimerase [EC:
5.1.3.1
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00030
Pentose phosphate pathway
rde00040
Pentose and glucuronate interconversions
rde00710
Carbon fixation by Calvin cycle
rde01100
Metabolic pathways
rde01110
Biosynthesis of secondary metabolites
rde01120
Microbial metabolism in diverse environments
rde01200
Carbon metabolism
rde01230
Biosynthesis of amino acids
Module
rde_M00007
Pentose phosphate pathway, non-oxidative phase, fructose-6P => ribose-5P
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
RD1_1105 (rpe)
00040 Pentose and glucuronate interconversions
RD1_1105 (rpe)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
RD1_1105 (rpe)
Enzymes [BR:
rde01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.1 ribulose-phosphate 3-epimerase
RD1_1105 (rpe)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribul_P_3_epim
Motif
Other DBs
NCBI-ProteinID:
ABG30761
RoseoBase:
RD1_1105
UniProt:
Q16B82
LinkDB
All DBs
Position
complement(1056551..1057243)
Genome browser
AA seq
230 aa
AA seq
DB search
MALNRSFKIAPSILSADFANFGAECEAIEAQGADWVHVDVMDGHFVPNITFGPSTCAAIR
PHIKTVMDVHLMIAPVDPYIDAFAKAGADVITAHVEAGPHIHRTMQAIRAAGAKAGVALN
PGTPASSVEYLLDMVDLVCVMTVNPGFGGQKFIHSQVEKVRQLRAMIGDRPIHIEIDGGV
DPTTAPLVAAAGADVLVAGSAVFRGGSVSNPAPYGANIKAIRDAVLSTTV
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggcactcaaccgctcattcaaaatcgcgccgtcgatcctctctgccgatttcgcgaac
tttggcgcggaatgcgaagccatagaggcgcaaggcgcggattgggtgcatgtggatgtg
atggatgggcatttcgtacccaacatcacctttggcccctcgacctgcgctgcgatccgc
ccgcatatcaagaccgtcatggacgtgcacctgatgatcgcacccgtcgatccttatatt
gatgcctttgccaaggcgggagccgatgtcatcaccgcccatgtcgaagcgggcccgcat
atccaccgcaccatgcaggccatccgcgcagctggcgcaaaggccggcgttgcgctgaac
cccggcacccctgcctcttcggtcgaatatctgctggatatggtcgatctggtctgtgtc
atgacggtaaaccccggttttggcgggcagaaattcatccacagtcaggttgaaaaggtg
cgccaactgcgtgcgatgatcggcgacaggcccatccatatcgaaatcgacggcggtgtt
gatcccaccaccgcgcccttggtggcggcggcgggcgcggatgtactggtcgcgggatcg
gccgtctttcgcggcgggtccgtcagcaaccccgcgccttacggggcgaacatcaaggcc
atacgcgacgcggttttgtcgacaaccgtctga
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