Roseobacter denitrificans: RD1_1190
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Entry
RD1_1190 CDS
T00376
Name
(GenBank) tetrapyrrole methylase domain protein
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rde03009
]
RD1_1190
Enzymes [BR:
rde01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
RD1_1190
Ribosome biogenesis [BR:
rde03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RD1_1190
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
AIRS_C
DUF6955
Motif
Other DBs
NCBI-ProteinID:
ABG30840
RoseoBase:
RD1_1190
UniProt:
Q16B03
LinkDB
All DBs
Position
1154785..1155642
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AA seq
285 aa
AA seq
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MNFQKVSLAAGLYFVGVPIGTARDITLRALDVLASADILAAEDTRSLRRLMDIHAVPLAG
RQVISLHDHTGGGTAARLVEAIAAGSSVAYASEAGMPLIADPGFELGRAVHAADQMVTCA
PGPSAVLTALVLAGLPTDAFFFAGFLPNAKAARRRGLEDLRDIPATLVIYESPKRLAAFL
ADAAEVFGGERQVSVCREITKKFEETRKGTLSELAAAYADQKVRGEIVVLIDRNRSEKIT
ESDLETDLTKALAGHSMRDAVDMVAKAHNIPRRQVYQMALALNEG
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
ttgaattttcaaaaggtgtctttggcggcggggctctattttgtcggcgtgccgatcggg
acggcgcgcgacattacgctcagggcgctggatgtgctggcaagcgcggatattctggcc
gcggaagacacgcgcagtctgcgccggttgatggatatacacgctgtgccgctggcgggc
aggcaggtgatctcgctgcacgatcacacaggtggtggaaccgccgcgcgtctggtcgaa
gcaatcgcagcggggtcatccgtggcctacgcgtcagaagccgggatgcccctgattgcg
gaccccggtttcgagttggggcgcgcggttcatgcggccgatcagatggtgacctgtgcg
ccgggaccatcagccgttttaacggcactggtacttgcgggcttgccgacggatgcgttt
ttctttgccggatttctgcccaatgccaaggcggcgcggcggcgtgggttggaagacctg
cgcgatattcccgcgacgcttgtaatctacgaatcgcccaagcgcctcgcagcgtttctt
gcagatgctgccgaggtgttcgggggcgaacggcaggtttccgtgtgtcgcgagatcacg
aagaagttcgaggagacccgaaagggaacgctgtcggaactggccgctgcctacgcggat
caaaaggtaaggggcgaaatcgtcgttctgattgaccgtaaccgttcagagaaaattacc
gaatctgatttagaaacggacctgacgaaggcgctggcagggcattccatgcgggatgcc
gtggatatggttgccaaggcgcataacataccgcgccgacaggtctatcagatggcgctt
gccctgaacgaaggatga
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