Roseobacter denitrificans: RD1_1266
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Entry
RD1_1266 CDS
T00376
Name
(GenBank) peptide ABC transporter, ATP-binding protein, putative
KO
K13896
microcin C transport system ATP-binding protein
Organism
rde
Roseobacter denitrificans
Pathway
rde02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RD1_1266
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_1266
Transporters [BR:
rde02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Microcin C transporter
RD1_1266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
oligo_HPY
AAA_25
AAA_16
nSTAND3
DO-GTPase2
AAA_29
AAA_22
NACHT
CbiA
PRK
DEAD
Mg_chelatase
GvpD_P-loop
APS_kinase
Pox_A32
ATP-synt_ab
ResIII
TIP49
NB-ARC
AAA_18
Roc
MobB
Zeta_toxin
SRP54
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ABG30912
RoseoBase:
RD1_1266
UniProt:
Q16AT1
LinkDB
All DBs
Position
1227785..1229365
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AA seq
526 aa
AA seq
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MSALLDVKDLVVKFRQDGALTTAVKGVSFSVERGETVALVGESGSGKSVSALSTVSLLGD
SAEVSGSVTYDGQQMIGASETLLRKVRGNDISFIFQEPMTSLNPLHTIEKQLGESLALHQ
ALSGAAARARIIELLEQVGIHDAATRVTSYPHQLSGGQRQRVMIAMALANKPDVLIADEP
TTALDVTIQAQILDLLKDLKDRLGMGLLFITHDLGIVRRIADKVCVMQHGEIVESGKTTE
IFANPQHPYTQKLLSAEPSGAPVSVPDQATIVAQTDNLKVWFPIEAGLLRRTVGHVKAVN
DASMSVRAGETIGVVGESGSGKTTMALALMRLIASEGKITFMDQDVRKWSTRQLRSLRKD
MQIVFQDPFGSLSPRMTCMQIIAEGLGIHSVDPDREHRDLVHDVMVEVGLDPATMDRYPH
EFSGGQRQRIAIARAMVLRPKLLVLDEPTSALDMTVQVQIVDLLRDLQKKYGLAYIFISH
DLRVVRAMSHRVMVMKRGDVVEAGSVEQVFEAPRHEYTRSLLAAAT
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcactgctggatgtgaaggacctggtggtaaaattcaggcaggacggcgcgttg
acgaccgccgtgaagggcgtgagcttttcggttgagcggggagaaaccgtcgccttggtg
ggcgaatccgggtcgggaaaatccgtctcggccttatccacggtgtctctgctgggggat
agcgccgaggtgtcgggctctgtcacctatgacggtcagcagatgatcggggcgagcgag
acgctgttgcgcaaggtgcggggcaatgacatcagctttatctttcaagagccgatgaca
tcgcttaaccccttgcacacaatcgaaaagcaactgggcgaaagccttgccttgcatcag
gcgctgagcggggccgcggcacgggcgcgtattatcgaactgcttgaacaggtgggtatc
catgacgccgcaacacgcgtgacaagctatccgcatcagctgtcgggcgggcaacgccag
cgggtcatgatcgccatggcgctggccaacaaaccggatgtgctgattgcggatgaaccc
acaactgcgttggatgtgacaattcaggcgcagattctcgacctgctcaaggatttgaag
gaccgtctgggcatgggtcttctgttcatcacccacgaccttggcattgtgcggcgcatt
gccgacaaggtctgcgtgatgcaacatggcgaaatcgtcgaaagcggcaaaaccaccgag
atatttgccaacccgcaacacccctacacgcaaaaactgttgagtgccgagccgtcgggc
gcgccggtctctgtgccggatcaggcgaccatcgtggcccagaccgacaacctcaaggtc
tggttcccgatcgaggcgggattgctgcgtcgcaccgtcgggcacgtcaaagcggtcaat
gatgccagcatgagcgtgcgcgcgggtgaaaccatcggcgtggtgggcgaatccgggtcg
ggtaagaccacgatggcgctggctctgatgcggctgatcgcgtcagagggcaagatcacc
ttcatggatcaggatgtgcgcaagtggtccacgcgtcagctgcgcagcctgcgcaaagac
atgcagatcgtgtttcaggaccctttcgggtcactcagcccgcggatgacctgtatgcag
atcattgccgaagggctgggcattcacagcgttgatccggaccgcgaacaccgggacctt
gtgcatgatgtgatggtggaggtgggcctcgatccggccacgatggaccgctatccgcat
gaattctccggaggacagcgtcagcgcatcgcaatcgcacgcgcgatggtgttgcgcccc
aaactgctggtgctggatgagccgacatcggcgctggatatgacggtacaggtgcagatc
gtggatttgctgcgggatctgcaaaagaaatacgggctggcctacattttcatcagccac
gatttgcgcgtcgtgcgcgccatgtcgcaccgcgtgatggtcatgaaacgcggtgatgtg
gttgaggcgggcagcgtcgagcaggtattcgaagcaccgcgccacgaatacacgcgcagc
ttgctggcggccgcgacctag
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