Roseobacter denitrificans: RD1_1267
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Entry
RD1_1267 CDS
T00376
Symbol
hemN
Name
(GenBank) oxygen-independent coproporphyrinogen III oxidase
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00860
Porphyrin metabolism
rde01100
Metabolic pathways
rde01110
Biosynthesis of secondary metabolites
rde01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RD1_1267 (hemN)
Enzymes [BR:
rde01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
RD1_1267 (hemN)
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Motif
Pfam:
Radical_SAM
SelB_WH_2nd_bact
Motif
Other DBs
NCBI-ProteinID:
ABG30913
RoseoBase:
RD1_1267
UniProt:
Q16AT0
LinkDB
All DBs
Position
complement(1229472..1230827)
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AA seq
451 aa
AA seq
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MTLTSKLAKLGLFDARVPRYTSYPTAPQFSADTTDADARAWIAAIPPGSRISLYLHIPFC
RRLCWFCACRTQGISNNGPVAAYLSTLKAELSMLAAILPPDISLSRVHWGGGTPTLFEAG
MIEELAGAINDLAPMAPNGEFSVEVDPNEIDQSRVDALAAAGMTRASIGVQDFDVEIQTT
IGRLQSFDVTRFAADMLRASGVHSLNTDILFGLPHQTTEKIAASVQKLLTLSPDRVALYG
YAHVPWMARRQSLIPSDALPAPEERLKLFETARQLFEWDGYRQIGIDHFAVPHDTLAVAA
RTGKLRRNFQGYTDEPAEVLIGLGASAISRFPQGYAQNNPSTSGYTKSIREGAFSTSRGH
CFSEDDRLRGRLIEAIMCDFEVDIDDMISRFPKREAHIRALLARAAAHFGDIVQLKKDRF
QVLPDGHALARIIARHFDAYEMSSAGHVSAI
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgacactgacatccaaactcgccaaattgggtctatttgacgcaagagttccgcgttac
accagctatccgacggctccgcagttttctgccgacaccacggacgctgacgcgcgcgcc
tggatcgctgcgataccgccgggaagccgcatttcattgtatttgcacataccgttttgc
cgacggttgtgttggttttgcgcctgccgcactcagggcatatcaaataatggcccagtg
gcggcctatctgtctacactaaaagcagaattaagtatgttggcggccattttaccgccc
gacatcagcctcagccgtgtccattggggcggcggcacgcccaccctgtttgaagcgggc
atgatcgaagagctggccggggcaatcaacgatctggcccccatggccccaaatggtgag
ttttcggtcgaagtcgaccccaatgaaatagaccagtcccgggtggatgcgctggcagcg
gccggtatgacccgcgcctcgattggcgtgcaggatttcgatgtcgagatacagacaacc
atcggccggctgcagagtttcgacgtgacacgctttgcggcggatatgttgcgggcctcg
ggggtgcattcgctgaacacggatatcctgtttggactgccacatcagacgacggaaaaa
attgccgccagtgtgcagaagcttcttacgttgtcgcctgatcgtgtcgcgctttacggc
tacgcgcatgtgccatggatggcgcggcgccaatcgctgattccgtccgatgcgctgcca
gcacccgaagagcggctgaaactctttgaaacagcccggcaactgtttgaatgggacggg
tatcgccagatcgggattgatcacttcgccgtgccacacgacacgctggccgtggccgcg
cggaccggcaaactgcgccgcaattttcaggggtatacggatgaaccggctgaagtgctg
atcggtctgggcgcatcggcaatttcgcgcttcccgcagggctatgctcaaaacaacccc
tcgacatccggctataccaaatccattcgcgaaggcgcgttttccacatcgcgcgggcat
tgcttttcagaggatgaccgactgcgcgggcgtctgatcgaagcgatcatgtgcgatttc
gaagtcgacatcgatgatatgatctcccgctttccgaagcgtgaagcgcacattcgggcc
ctgctggcgcgggccgcagcccattttggcgatatcgttcaacttaaaaaagacaggttc
caggttttgcccgatgggcacgcgctggcacggatcatagcgcgccattttgatgcctat
gaaatgtccagcgcgggacatgtgtcggcaatctga
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