Roseobacter denitrificans: RD1_1326
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Entry
RD1_1326 CDS
T00376
Symbol
pdhR
Name
(GenBank) pyruvate dehydrogenase complex repressor
KO
K05799
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rde03000
]
RD1_1326 (pdhR)
Transcription factors [BR:
rde03000
]
Prokaryotic type
Helix-turn-helix
GntR family
RD1_1326 (pdhR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
HTH_Crp_2
Rrf2
MarR_2
Fe_dep_repress
HTH_36
HTH_11
Motif
Other DBs
NCBI-ProteinID:
ABG30969
RoseoBase:
RD1_1326
UniProt:
Q16AM4
LinkDB
All DBs
Position
complement(1275919..1276704)
Genome browser
AA seq
261 aa
AA seq
DB search
MPFRPVVSEKLSIAVVHQIEELILRGILLPDERLPAERELAERLCVSRPSLREAIGLLQD
KGLLTTRAGAGVYVADVLGSAFSPALVELFARHDRAKFDYLSFRRDMEGLAAERATRLAS
ETDLRVVQEIFDQMEVAHGKRNPENDAHLDAKFHMAIIEASHNVVMLHMMRSMYQLLREG
VFYNRQVIFKQRTTRSVLLDQHRAINTALQARDGAGARAAVAAHLDYIETSLRDDVRAAE
NEETAQRRLDHVKETGRATGR
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgccatttcgccccgtcgtttctgaaaaactgtcgattgccgtggtgcatcagatcgaa
gagttgatcctgcgcggcatcctgttgcccgatgaacggctgcctgcggaacgggaactg
gcggaacggctctgcgtgtcccggcccagcctgcgcgaagccatcgggctcttgcaggac
aagggtctgttgacgaccagagccggtgcgggtgtctacgtggcggatgttctggggtcc
gcgttttccccggccctcgtcgagcttttcgcccgtcatgacagggcaaaattcgactac
ctctccttccgccgagacatggaggggctggccgcagaacgggcgacgcggctggcgtct
gaaaccgatctgcgcgtggtgcaggaaattttcgatcagatggaagtcgcccatggcaag
cgcaatcctgaaaacgatgcgcatctggatgcgaaattccatatggcgatcatagaagcc
agccacaacgtggtcatgctgcacatgatgcgctccatgtatcaattgctgcgcgagggc
gtgttctacaaccggcaggtcatattcaaacagcgcacgacccgcagcgtgctgctggac
cagcaccgtgcgatcaacaccgccctgcaagcccgggatggcgccggggcgcgcgccgcc
gtggccgcacatctcgactacatcgaaacctcgctgcgcgatgacgtcagggccgccgaa
aacgaagagacggcgcagcgtcgtctggatcacgtcaaggaaacggggcgtgcaaccggg
cgctag
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