Roseobacter denitrificans: RD1_1327
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Entry
RD1_1327 CDS
T00376
Symbol
smc
Name
(GenBank) chromosome segregation protein, putative
KO
K03529
chromosome segregation protein
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rde03036
]
RD1_1327 (smc)
Chromosome and associated proteins [BR:
rde03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
RD1_1327 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
ABC_tran
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ABG30970
RoseoBase:
RD1_1327
UniProt:
Q16AM3
LinkDB
All DBs
Position
1276870..1280379
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AA seq
1169 aa
AA seq
DB search
MGHCGGRLKSLGINGHIAVRFSKLRLTGFKSFVDPTDLVIADGLTGVVGPNGCGKSNLLE
ALRWVMGENRPTAMRGGGMEDVIFAGASTRPARNFAEVSLQIDNSERLAPAGFNDDDVLE
IVRRITRDVGSAYKVGARDVRARDVQMLFADASTGAHSPALVRQGQIAELINAKPKSRRR
ILEEAAGISGLYQRRHEAELKLKGAETNLARVDDVIEQLAAQLAQLARQARQAARYREIG
NDLRRAEGMLLYRRWREADEARAAAEDALRAQVTAAAQAEGAVRQAAKARVAAEEALPPL
REEEAVAGAIVQRLAVQRDTLADQDARAQSLIETLNGRIAQLSRDIEREGGLNRDAGETI
ARLEWEAQELEKAAEGHDEALAAAAEAAREAAAVLQTREGEMSEQTEDVARLAARHGSAQ
RLLEDSRKTKEKAESEAAKAREAVAASTQALTKARSDFAVAQEAEATAVTQAAAADKALI
DAEEARADTQAREAEARAQRSEAEGELNALRAEVGALAKLLERDTAEGGQILDRLQVGHG
FEKALGAALADDLRAPQVEVDGPSGWSVLPAYPAPQPLPEGVTPLTLHVSVPDVLERRMS
QIGLIEPEDAPRLQAALKPGQRLVSTEGDLWRWDGYRAWAEDAPSAAALRLQQLNRLEEL
KQALEQATQRAGGARAAHDALKLQLEELSRADAQAREARRAADRAVADAGRALSRAEADR
NLAEGRLESLGLAVSRHEEEAMGARTRLKEAETALAELGDLAEARDRVEAIRTAVEASRI
TMMSRRSAHDELRREGEARTRRAQEVTKEISGWRHRLETAEKRNAELIERKATAEAELKE
ASAAPDEIAAKRAELSEAITVAEARKAQASDKLSVAEAALRDSTMAEREAERLASEAREE
RARAEARSDAAKETVAIAAERIADDAQLTPNQLLQQLDVTPDDMPRAEALEADVNRLKRQ
RDALGAVNLRAEEDAKEVQVEHDTLVQEKNDLEEAIRTLRGGIASLNREGRERLLTAFEQ
VNSNFSLLFTHLFGGGEANLVMVESDDPLEAGLEIMCQPPGKKLSTLSLLSGGEQTLTAM
ALIFAVFLANPAPICVLDEVDAPLDDANVTRFCDLLDEMCRQTDTRFLIITHHAVTMARM
DRLFGVTMAEQGVSQLVSVDLKKAETLVA
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atggggcattgcggcggcaggctgaaatctctgggaatcaatggacacatcgcggtgcgt
ttttcaaaactcaggctgactggcttcaaaagctttgtggatccgaccgatctggtgatc
gcggacgggttgaccggcgtggtcgggccgaacggctgtggcaaatccaacctgttggaa
gcgctgcgctgggtcatgggcgaaaaccggcccaccgccatgcgcggcggcgggatggag
gacgtgattttcgcaggggcctccacgcgacctgcgcgcaattttgccgaagtgtccttg
cagattgacaactcggagcggctggctccggcggggttcaatgatgatgatgtgctggaa
atcgtgcgccggatcacccgcgatgtgggcagtgcctataaggtcggggcgcgcgatgtg
cgcgcgcgcgatgtgcagatgctctttgcggatgcatcgacaggggcgcattcgcccgcg
ctggtccgtcagggacagattgccgaattgatcaatgccaaacccaaaagccggcggcgc
atcctcgaagaagcggcggggatttcgggtctctatcagcgccgacatgaggccgagctg
aagctgaagggggcggagacaaacctcgcccgcgttgatgatgtgatcgagcaactggcg
gcgcaattggcgcaactggcgcgtcaggcccggcaagcggcgcgctatcgtgagatcggt
aatgacctgcgtcgcgccgagggcatgttgctgtatcggcgctggcgcgaggccgatgag
gcccgtgccgctgcggaggatgcgctgcgtgcgcaggtcacggcagcggcgcaggcggag
ggcgcggtcaggcaggcggccaaggcgcgtgtggcagcggaagaagccctgccgcctttg
cgcgaagaggaagcggtcgcgggcgcaatcgtgcaacgtctggctgtgcagcgggacacg
ctggcggatcaggacgcgcgtgcgcagtcgctgatcgagacgttgaatggccgcatcgca
cagttgagccgcgacatagagcgcgaaggcgggttgaaccgggatgcgggggaaaccatc
gcgcgtcttgagtgggaagcgcaggagttggaaaaggccgctgaaggccacgatgaggcc
ttggcggcggcggcggaagcggcccgggaagcggcggctgttttgcagacgcgcgagggc
gagatgtcggaacagaccgaggatgtggcccgccttgcggcgcgtcatgggtcagcccag
cggttgttggaagacagccgcaagaccaaggagaaggccgaaagcgaggccgcaaaggcg
cgcgaggccgttgccgcttcaacgcaggcgctgacaaaggcgcgcagtgattttgcggtt
gcgcaggaggccgaggcgacggcggtgacgcaggcagcggcggcggataaggcattgatt
gacgccgaagaggcgcgcgcggacacgcaggcgcgcgaagcggaggcgcgtgcgcagaga
tctgaggcagagggcgagttgaacgcgctgcgcgccgaggttggcgcattggcgaagttg
ttggagcgtgacacagccgaaggtgggcaaattctggaccgcttgcaggtcgggcatggg
tttgaaaaggctttgggcgcggcccttgcggatgatttgcgcgcgccgcaggttgaggtg
gacggcccttcgggctggtccgtgttgccggcctatcctgcgccgcaacccctgccggag
ggggtaacgccgctgacgctgcatgtgtcggtgccggatgtgttggagcggcggatgagc
cagatcgggttgatcgagcccgaagatgcgccgcgtttgcaagcagccttgaagccgggg
cagcggctggtttccaccgagggggatttgtggcgctgggatggctatcgcgcctgggcc
gaggatgcgccgtcggcagcggcgctgcgcttgcagcagctgaaccggcttgaggaattg
aaacaggcacttgagcaggccacgcaacgcgcaggtggagcacgggccgcgcatgatgcg
ctgaaactccagttggaagagttgagccgtgcggatgcgcaagcgcgcgaggcgcggcgt
gcggcggaccgtgcggtggccgatgcggggcgcgccctgagccgggccgaagcggatcgc
aatcttgccgaaggtcggcttgaatcgctgggtctggcggtgtcgcggcacgaagaagag
gcgatgggcgcgcggacgcgtctgaaagaagcggaaacagcgctggcggaactgggtgat
ctggccgaagcgcgtgaccgggtcgaggcgatccgcaccgccgttgaggcctcgcgcatc
acgatgatgtcgcgccggtccgcgcatgatgagttgcgccgtgagggggaggcccggacc
aggcgcgcgcaggaagtgaccaaggagatcagcggctggcggcaccgtcttgaaacggcc
gagaaacgcaatgcggaactgatcgagcgcaaggccacggccgaggcggagttgaaagag
gccagtgcggcaccggacgaaatcgccgccaaacgcgcagaactcagcgaggcgatcact
gtggcggaggcgcgcaaggcgcaggccagtgacaagttgtccgtggcggaagcagctctg
cgcgacagcacaatggccgagcgtgaggccgagcgtctggcgtccgaggcgcgtgaggag
cgtgccagagccgaggcgcgcagcgatgccgcaaaggagaccgttgcaatcgcagcggag
cgtatcgcggatgacgcgcaactgacgccgaaccagttgctgcaacaactggatgtgaca
cccgatgacatgccccgcgccgaagcgcttgaggcggatgtcaatcgcctgaagcgtcag
cgggatgccttgggggctgtgaacctgcgcgcggaagaagacgccaaggaagtgcaggtc
gagcatgacacgctggtgcaggagaagaacgatctggaagaggcgatccggaccctgcgc
ggtggcatcgcaagcctcaatcgggaagggcgcgagcggcttttgaccgctttcgagcag
gtcaattccaatttttcgctgctgttcacgcatctgtttggcgggggtgaagccaacctt
gtcatggtggaaagcgatgacccgcttgaggccgggctggagatcatgtgccagccgccc
ggtaagaaactgtcgacgctgagccttttgtccggcggagagcagacgctgaccgcgatg
gcgttgatttttgcggtgtttctggccaaccccgcgccgatctgcgtgctcgacgaggtg
gatgcaccactggatgacgccaatgtgacgcggttttgcgacttgctggacgagatgtgc
cgccagaccgacacccggtttctgatcatcacccaccatgcggtcaccatggcgcgcatg
gaccgactgttcggggtgacgatggcggaacaaggggtcagccagcttgtgtcggttgat
ctgaaaaaggcggagacgctggttgcctga
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